(44 nodes) Axon extension network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fam53b	Family with sequence similarity 53 member B. (411 aa)
	myo9a	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2684 aa)
	LOC101068750	Si:ch211-113g11.6; Belongs to the semaphorin family. (638 aa)
	ENSTRUP00000081498	Thrombospondin, type I, domain containing 7Aa. (1606 aa)
	mycbp2	MYC binding protein 2. (4779 aa)
	LOC105417227	Sema domain-containing protein; Belongs to the semaphorin family. (613 aa)
	ENSTRUP00000086078	annotation not available (302 aa)
	LOC101079526	Endothelin 2. (156 aa)
	ulk2	Unc-51 like autophagy activating kinase 2. (1040 aa)
	auts2	Activator of transcription and developmental regulator AUTS2 a. (1269 aa)
	dclk1	Doublecortin-like kinase 1b. (735 aa)
	LOC101071113	Vinculin a. (1138 aa)
	LOC101072191	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (822 aa)
	LOC101075743	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2367 aa)
	LOC101062791	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (805 aa)
	ulk1	Serine/threonine-protein kinase ULK1 isoform X1. (1088 aa)
	sema5a	Sema domain-containing protein. (1080 aa)
	LOC101073885	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a. (1446 aa)
	spast	Spastin; Belongs to the AAA ATPase family. (471 aa)
	smn	Tudor domain-containing protein. (278 aa)
	c9orf72	Zgc:100846. (462 aa)
	LOC101074317	Thrombospondin, type I, domain containing 7Aa. (1606 aa)
	FAM53B	Uncharacterized protein. (423 aa)
	LOC101061888	Slit homolog 1b (Drosophila). (1558 aa)
	slit1	Slit homolog 1a (Drosophila). (1546 aa)
	cyfip1	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1253 aa)
	LOC101073360	Sjogren syndrome nuclear autoantigen 1. (120 aa)
	H2TNI3_TAKRU	Sjogren syndrome nuclear autoantigen 1. (110 aa)
	LOC101066372	MADS-box domain-containing protein. (514 aa)
	LOC101076837	Unc-51 like autophagy activating kinase 1a. (846 aa)
	vcl	Vinculin b. (1017 aa)
	sema7a	Semaphorin 7A; Belongs to the semaphorin family. (684 aa)
	spg11	Spatacsin_C domain-containing protein. (2378 aa)
	ednra	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (448 aa)
	LOC101078252	Slit homolog 3 (Drosophila). (1532 aa)
	ryk	Receptor like tyrosine kinase. (624 aa)
	LOC101079790	Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (458 aa)
	srf	Serum response factor b. (541 aa)
	sema5b	Sema domain-containing protein. (1105 aa)
	LOC101064095	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1330 aa)
	LOC101073815	Sjogren syndrome nuclear autoantigen 1. (142 aa)
	edn1	Endothelin 1. (137 aa)
	LOC101073132	Sjogren syndrome nuclear autoantigen 1. (114 aa)
	DCX	Doublecortin. (350 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCX	dclk1	ENSTRUP00000059342	ENSTRUP00000078151	Doublecortin.	Doublecortin-like kinase 1b.	0.761
LOC101061888	LOC101075743	ENSTRUP00000015789	ENSTRUP00000069911	Slit homolog 1b (Drosophila).	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.445
LOC101061888	myo9a	ENSTRUP00000015789	ENSTRUP00000079639	Slit homolog 1b (Drosophila).	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.445
LOC101064095	LOC101071113	ENSTRUP00000050250	ENSTRUP00000078012	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Vinculin a.	0.507
LOC101064095	vcl	ENSTRUP00000050250	ENSTRUP00000033394	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	Vinculin b.	0.507
LOC101066372	srf	ENSTRUP00000028912	ENSTRUP00000044937	MADS-box domain-containing protein.	Serum response factor b.	0.903
LOC101071113	LOC101064095	ENSTRUP00000078012	ENSTRUP00000050250	Vinculin a.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	0.507
LOC101071113	LOC101073885	ENSTRUP00000078012	ENSTRUP00000060752	Vinculin a.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a.	0.507
LOC101073885	LOC101071113	ENSTRUP00000060752	ENSTRUP00000078012	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a.	Vinculin a.	0.507
LOC101073885	vcl	ENSTRUP00000060752	ENSTRUP00000033394	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a.	Vinculin b.	0.507
LOC101075743	LOC101061888	ENSTRUP00000069911	ENSTRUP00000015789	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Slit homolog 1b (Drosophila).	0.445
LOC101075743	LOC101078252	ENSTRUP00000069911	ENSTRUP00000038164	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Slit homolog 3 (Drosophila).	0.445
LOC101075743	slit1	ENSTRUP00000069911	ENSTRUP00000022087	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Slit homolog 1a (Drosophila).	0.445
LOC101075743	smn	ENSTRUP00000069911	ENSTRUP00000001768	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Tudor domain-containing protein.	0.436
LOC101076837	c9orf72	ENSTRUP00000029853	ENSTRUP00000002461	Unc-51 like autophagy activating kinase 1a.	Zgc:100846.	0.933
LOC101076837	ulk1	ENSTRUP00000029853	ENSTRUP00000068366	Unc-51 like autophagy activating kinase 1a.	Serine/threonine-protein kinase ULK1 isoform X1.	0.903
LOC101076837	ulk2	ENSTRUP00000029853	ENSTRUP00000058225	Unc-51 like autophagy activating kinase 1a.	Unc-51 like autophagy activating kinase 2.	0.907
LOC101078252	LOC101075743	ENSTRUP00000038164	ENSTRUP00000069911	Slit homolog 3 (Drosophila).	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.445
LOC101078252	myo9a	ENSTRUP00000038164	ENSTRUP00000079639	Slit homolog 3 (Drosophila).	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.445
LOC101079526	LOC101079790	ENSTRUP00000056551	ENSTRUP00000044819	Endothelin 2.	Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family.	0.956