23 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101070662-2	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (190 aa)
	met	Uncharacterized protein. (1425 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (218 aa)
	LOC101075732	Uncharacterized protein LOC101075732 isoform X1. (505 aa)
	LOC101070662	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (191 aa)
	tsc2	TSC complex subunit 2. (1824 aa)
	H2TDZ2_TAKRU	Galectin. (214 aa)
	LOC101071528	Macrophage stimulating 1 receptor a. (1375 aa)
	LOC101062196	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (169 aa)
	vegfc	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (421 aa)
	LOC101068421	Secretogranin II (chromogranin C), b. (592 aa)
	mst1r	Macrophage stimulating 1 receptor b. (1374 aa)
	lrrc1	Leucine rich repeat containing 1. (604 aa)
	vegfd	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (305 aa)
	LOC101067669	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (112 aa)
	pdgfb	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (542 aa)
	LOC101079160	Galectin. (356 aa)
	LOC101061771	Galectin. (373 aa)
	vegfb	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (258 aa)
	fgf7	Fibroblast growth factor 7; Belongs to the heparin-binding growth factors family. (238 aa)
	scg2	Uncharacterized protein. (630 aa)
	alkbh1	AlkB homolog 1, histone H2A dioxygenase. (367 aa)
	scrib	Scribble planar cell polarity protein. (1751 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101062196	met	ENSTRUP00000028519	ENSTRUP00000078415	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Uncharacterized protein.	0.711
LOC101067669	LOC101070662	ENSTRUP00000046516	ENSTRUP00000021515	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.512
LOC101067669	LOC101070662-2	ENSTRUP00000046516	ENSTRUP00000074487	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.512
LOC101067669	met	ENSTRUP00000046516	ENSTRUP00000078415	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Uncharacterized protein.	0.665
LOC101067669	vegfa	ENSTRUP00000046516	ENSTRUP00000077408	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.	0.444
LOC101067669	vegfb	ENSTRUP00000046516	ENSTRUP00000056656	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.576
LOC101067669	vegfc	ENSTRUP00000046516	ENSTRUP00000029772	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	0.666
LOC101067669	vegfd	ENSTRUP00000046516	ENSTRUP00000043637	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.	0.520
LOC101070662	LOC101067669	ENSTRUP00000021515	ENSTRUP00000046516	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.512
LOC101070662	met	ENSTRUP00000021515	ENSTRUP00000078415	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Uncharacterized protein.	0.674
LOC101070662	vegfb	ENSTRUP00000021515	ENSTRUP00000056656	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.912
LOC101070662	vegfd	ENSTRUP00000021515	ENSTRUP00000043637	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.	0.405
LOC101070662-2	LOC101067669	ENSTRUP00000074487	ENSTRUP00000046516	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.512
LOC101070662-2	vegfd	ENSTRUP00000074487	ENSTRUP00000043637	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.	0.405
LOC101071528	met	ENSTRUP00000025241	ENSTRUP00000078415	Macrophage stimulating 1 receptor a.	Uncharacterized protein.	0.677
LOC101071528	mst1r	ENSTRUP00000025241	ENSTRUP00000035729	Macrophage stimulating 1 receptor a.	Macrophage stimulating 1 receptor b.	0.683
fgf7	vegfa	ENSTRUP00000056954	ENSTRUP00000077408	Fibroblast growth factor 7; Belongs to the heparin-binding growth factors family.	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.	0.410
met	LOC101062196	ENSTRUP00000078415	ENSTRUP00000028519	Uncharacterized protein.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.711
met	LOC101067669	ENSTRUP00000078415	ENSTRUP00000046516	Uncharacterized protein.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.665
met	LOC101070662	ENSTRUP00000078415	ENSTRUP00000021515	Uncharacterized protein.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.674