STRINGSTRING
shh shh sox17 sox17 SMAD4 SMAD4 LOC101068466 LOC101068466 SOX18 SOX18 LOC101072080 LOC101072080 ENSTRUP00000076792 ENSTRUP00000076792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
sox17SRY-box transcription factor 17. (399 aa)
SMAD4Mothers against decapentaplegic homolog. (521 aa)
LOC101068466Mothers against decapentaplegic homolog 4-like. (557 aa)
SOX18SRY-box transcription factor 18. (561 aa)
LOC101072080Mothers against decapentaplegic homolog. (651 aa)
ENSTRUP00000076792annotation not available (236 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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