8 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RNF5	RING-type domain-containing protein. (223 aa)
	bag6	BCL2 associated athanogene 6. (1219 aa)
	aup1	AUP1 lipid droplet regulating VLDL assembly factor. (411 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (819 aa)
	rnf185	Ring finger protein 185. (190 aa)
	ufd1	Ubiquitin recognition factor in ER associated degradation 1. (400 aa)
	uggt2	UDP-glucose glycoprotein glucosyltransferase 2. (1550 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1535 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RNF5	rnf185	ENSTRUP00000007466	ENSTRUP00000055903	RING-type domain-containing protein.	Ring finger protein 185.	0.914
RNF5	vcp	ENSTRUP00000007466	ENSTRUP00000045516	RING-type domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.618
aup1	vcp	ENSTRUP00000018276	ENSTRUP00000045516	AUP1 lipid droplet regulating VLDL assembly factor.	Valosin containing protein; Belongs to the AAA ATPase family.	0.656
bag6	vcp	ENSTRUP00000014707	ENSTRUP00000045516	BCL2 associated athanogene 6.	Valosin containing protein; Belongs to the AAA ATPase family.	0.467
rnf185	RNF5	ENSTRUP00000055903	ENSTRUP00000007466	Ring finger protein 185.	RING-type domain-containing protein.	0.914
rnf185	vcp	ENSTRUP00000055903	ENSTRUP00000045516	Ring finger protein 185.	Valosin containing protein; Belongs to the AAA ATPase family.	0.618
ufd1	vcp	ENSTRUP00000057122	ENSTRUP00000045516	Ubiquitin recognition factor in ER associated degradation 1.	Valosin containing protein; Belongs to the AAA ATPase family.	0.995
uggt1	uggt2	ENSTRUP00000076499	ENSTRUP00000071757	UDP-glucose glycoprotein glucosyltransferase 1.	UDP-glucose glycoprotein glucosyltransferase 2.	0.902
uggt2	uggt1	ENSTRUP00000071757	ENSTRUP00000076499	UDP-glucose glycoprotein glucosyltransferase 2.	UDP-glucose glycoprotein glucosyltransferase 1.	0.902
vcp	RNF5	ENSTRUP00000045516	ENSTRUP00000007466	Valosin containing protein; Belongs to the AAA ATPase family.	RING-type domain-containing protein.	0.618
vcp	aup1	ENSTRUP00000045516	ENSTRUP00000018276	Valosin containing protein; Belongs to the AAA ATPase family.	AUP1 lipid droplet regulating VLDL assembly factor.	0.656
vcp	bag6	ENSTRUP00000045516	ENSTRUP00000014707	Valosin containing protein; Belongs to the AAA ATPase family.	BCL2 associated athanogene 6.	0.467
vcp	rnf185	ENSTRUP00000045516	ENSTRUP00000055903	Valosin containing protein; Belongs to the AAA ATPase family.	Ring finger protein 185.	0.618
vcp	ufd1	ENSTRUP00000045516	ENSTRUP00000057122	Valosin containing protein; Belongs to the AAA ATPase family.	Ubiquitin recognition factor in ER associated degradation 1.	0.995