21 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101065281	Tyrosine-protein kinase. (552 aa)
	LOC101076633	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (633 aa)
	ENSTRUP00000076193	Leucine-rich repeat kinase 1. (2249 aa)
	ENSTRUP00000073441	ATPase H+ transporting accessory protein 1a. (460 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (652 aa)
	LOC115248448	E1A binding protein p300 b. (2795 aa)
	LOC101066314	Leucine-rich repeat serine/threonine-protein kinase 1-like isoform X1. (2050 aa)
	ENSTRUP00000064066	E1A binding protein p300 b. (2625 aa)
	sh2b3	SH2B adapter protein 3 isoform X1. (747 aa)
	fam20c2	FAM20C2. (558 aa)
	fam20c1	FAM20C1. (619 aa)
	LOC101080086	TNF superfamily member 11; Belongs to the tumor necrosis factor family. (266 aa)
	src	Tyrosine-protein kinase. (552 aa)
	srf	Serum response factor b. (541 aa)
	LOC101070643	E1A binding protein p300 a. (2046 aa)
	atp6ap1	ATPase H+ transporting accessory protein 1a. (474 aa)
	LOC101066372	MADS-box domain-containing protein. (514 aa)
	ABI1	Abl-interactor 1a. (540 aa)
	LOC101071264	ATPase H+ transporting accessory protein 1b. (467 aa)
	H2T1L2_TAKRU	Glycoprotein IX (platelet). (272 aa)
	LOC101069559	Abl-interactor 1b. (513 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101065281	LOC101076633	ENSTRUP00000084615	ENSTRUP00000081843	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.606
LOC101065281	ptpn6	ENSTRUP00000084615	ENSTRUP00000069984	Tyrosine-protein kinase.	Protein tyrosine phosphatase non-receptor type 6.	0.517
LOC101065281	src	ENSTRUP00000084615	ENSTRUP00000047001	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101066372	srf	ENSTRUP00000028912	ENSTRUP00000044937	MADS-box domain-containing protein.	Serum response factor b.	0.903
LOC101076633	LOC101065281	ENSTRUP00000081843	ENSTRUP00000084615	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.606
LOC101076633	src	ENSTRUP00000081843	ENSTRUP00000047001	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.606
ptpn6	LOC101065281	ENSTRUP00000069984	ENSTRUP00000084615	Protein tyrosine phosphatase non-receptor type 6.	Tyrosine-protein kinase.	0.517
ptpn6	src	ENSTRUP00000069984	ENSTRUP00000047001	Protein tyrosine phosphatase non-receptor type 6.	Tyrosine-protein kinase.	0.517
src	LOC101065281	ENSTRUP00000047001	ENSTRUP00000084615	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
src	LOC101076633	ENSTRUP00000047001	ENSTRUP00000081843	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.606
src	ptpn6	ENSTRUP00000047001	ENSTRUP00000069984	Tyrosine-protein kinase.	Protein tyrosine phosphatase non-receptor type 6.	0.517
srf	LOC101066372	ENSTRUP00000044937	ENSTRUP00000028912	Serum response factor b.	MADS-box domain-containing protein.	0.903