46 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101080220	Cyclin D2, b; Belongs to the cyclin family. (294 aa)
	mtbp	Ig-like domain-containing protein. (882 aa)
	LSM10	LSM10, U7 small nuclear RNA associated. (123 aa)
	cdc27	Cell division cycle 27. (839 aa)
	LOC101073562	Cyclin D2, a; Belongs to the cyclin family. (296 aa)
	cdc7	Cell division cycle 7 homolog (S. cerevisiae). (534 aa)
	H2S6A2_TAKRU	PDZ domain-containing protein. (275 aa)
	LOC115246432	Chromatin licensing and DNA replication factor 1. (619 aa)
	nsmce2	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (225 aa)
	plrg1	Pleiotropic regulator 1. (513 aa)
	sass6	SAS-6 centriolar assembly protein. (590 aa)
	LOC101075419	Cleavage and polyadenylation specific factor 3. (696 aa)
	LOC101075639	ADAM metallopeptidase domain 17b. (842 aa)
	pagr1	PAXIP1 associated glutamate-rich protein 1. (273 aa)
	cdca5	Cell division cycle associated 5. (249 aa)
	mapk15	Mitogen-activated protein kinase. (598 aa)
	lsm11	LSM11, U7 small nuclear RNA associated. (323 aa)
	cul3	Cullin 3a; Belongs to the cullin family. (767 aa)
	stil	STIL centriolar assembly protein. (1118 aa)
	cul4a	Cullin 4A; Belongs to the cullin family. (741 aa)
	anapc11	APC11 anaphase promoting complex subunit 11 homolog (yeast). (84 aa)
	anapc7	Anaphase promoting complex subunit 7. (567 aa)
	mad2l1bp	MAD2L1 binding protein. (252 aa)
	mecp2	Methyl CpG binding protein 2. (988 aa)
	LOC101079872	RAD51 paralog C. (346 aa)
	Kmt2e	Lysine (K)-specific methyltransferase 2E. (594 aa)
	LOC101069848	Retinoblastoma-associated protein. (913 aa)
	ube2c	Uncharacterized protein. (301 aa)
	cdc25b	Cell division cycle 25B. (606 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (567 aa)
	ppp1r10	Protein phosphatase 1, regulatory subunit 10. (800 aa)
	LOC101079092	Family with sequence similarity 83 member D. (490 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (914 aa)
	mblac1	Metallo-beta-lactamase domain containing 1. (217 aa)
	LOC101071855	Chromatin licensing and DNA replication factor 1. (657 aa)
	stox1	Storkhead box 1. (1094 aa)
	cdc16	Cell division cycle 16 homolog (S. cerevisiae). (620 aa)
	cdc23	CDC23 (cell division cycle 23, yeast, homolog). (587 aa)
	anapc5	Anaphase promoting complex subunit 5. (770 aa)
	LOC101062397	Allograft inflammatory factor 1. (147 aa)
	LOC115246431	Retinoblastoma 1. (913 aa)
	ccnd1	Cyclin D1. (292 aa)
	chek2	Checkpoint kinase 2. (538 aa)
	adam17	ADAM metallopeptidase domain 17a. (868 aa)
	thoc1	THO complex 1. (654 aa)
	H2U2H7_TAKRU	Uncharacterized protein. (718 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2U2H7_TAKRU	LOC101071855	ENSTRUP00000031138	ENSTRUP00000052984	Uncharacterized protein.	Chromatin licensing and DNA replication factor 1.	0.702
H2U2H7_TAKRU	LOC101079872	ENSTRUP00000031138	ENSTRUP00000072268	Uncharacterized protein.	RAD51 paralog C.	0.775
H2U2H7_TAKRU	LOC115246432	ENSTRUP00000031138	ENSTRUP00000012243	Uncharacterized protein.	Chromatin licensing and DNA replication factor 1.	0.702
H2U2H7_TAKRU	chek2	ENSTRUP00000031138	ENSTRUP00000035807	Uncharacterized protein.	Checkpoint kinase 2.	0.573
H2U2H7_TAKRU	cul4a	ENSTRUP00000031138	ENSTRUP00000064210	Uncharacterized protein.	Cullin 4A; Belongs to the cullin family.	0.580
H2U2H7_TAKRU	cul4b	ENSTRUP00000031138	ENSTRUP00000061608	Uncharacterized protein.	Cullin 4B; Belongs to the cullin family.	0.580
H2U2H7_TAKRU	sass6	ENSTRUP00000031138	ENSTRUP00000015629	Uncharacterized protein.	SAS-6 centriolar assembly protein.	0.622
LOC101069848	LOC101071855	ENSTRUP00000081329	ENSTRUP00000052984	Retinoblastoma-associated protein.	Chromatin licensing and DNA replication factor 1.	0.480
LOC101069848	LOC101073562	ENSTRUP00000081329	ENSTRUP00000004194	Retinoblastoma-associated protein.	Cyclin D2, a; Belongs to the cyclin family.	0.754
LOC101069848	LOC101080220	ENSTRUP00000081329	ENSTRUP00000027529	Retinoblastoma-associated protein.	Cyclin D2, b; Belongs to the cyclin family.	0.754
LOC101069848	LOC115246432	ENSTRUP00000081329	ENSTRUP00000012243	Retinoblastoma-associated protein.	Chromatin licensing and DNA replication factor 1.	0.480
LOC101069848	ccnd1	ENSTRUP00000081329	ENSTRUP00000040259	Retinoblastoma-associated protein.	Cyclin D1.	0.819
LOC101069848	cdc16	ENSTRUP00000081329	ENSTRUP00000048489	Retinoblastoma-associated protein.	Cell division cycle 16 homolog (S. cerevisiae).	0.636
LOC101069848	cdc27	ENSTRUP00000081329	ENSTRUP00000001702	Retinoblastoma-associated protein.	Cell division cycle 27.	0.618
LOC101069848	cul3	ENSTRUP00000081329	ENSTRUP00000024763	Retinoblastoma-associated protein.	Cullin 3a; Belongs to the cullin family.	0.581
LOC101069848	ube2c	ENSTRUP00000081329	ENSTRUP00000084034	Retinoblastoma-associated protein.	Uncharacterized protein.	0.500
LOC101071855	H2U2H7_TAKRU	ENSTRUP00000052984	ENSTRUP00000031138	Chromatin licensing and DNA replication factor 1.	Uncharacterized protein.	0.702
LOC101071855	LOC101069848	ENSTRUP00000052984	ENSTRUP00000081329	Chromatin licensing and DNA replication factor 1.	Retinoblastoma-associated protein.	0.480
LOC101071855	LOC115246431	ENSTRUP00000052984	ENSTRUP00000040486	Chromatin licensing and DNA replication factor 1.	Retinoblastoma 1.	0.480
LOC101071855	anapc11	ENSTRUP00000052984	ENSTRUP00000065829	Chromatin licensing and DNA replication factor 1.	APC11 anaphase promoting complex subunit 11 homolog (yeast).	0.508