31 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	prdm5	Zinc finger protein. (631 aa)
	LOC101078584	Dystroglycan 1. (862 aa)
	tnfrsf1a	Tumor necrosis factor receptor superfamily member 1A. (378 aa)
	LOC101076818	EMI domain-containing protein. (1145 aa)
	abl2	Tyrosine-protein kinase. (1214 aa)
	LOC101080041	Uncharacterized protein. (764 aa)
	phldb3	PH domain-containing protein. (83 aa)
	angptl7	Angiopoietin-like 7. (340 aa)
	phldb1	Pleckstrin homology-like domain, family B, member 1b. (409 aa)
	agt	Angiotensinogen; Belongs to the serpin family. (422 aa)
	LOC101072864	Collagen beta(1-O)galactosyltransferase 1. (615 aa)
	RIC1	RIC1 homolog, RAB6A GEF complex partner 1. (1442 aa)
	tnfrsf14	Tumor necrosis factor receptor superfamily, member 1B. (489 aa)
	LOC101073251	Uncharacterized protein. (82 aa)
	LOC115246431	Retinoblastoma 1. (913 aa)
	LOC101063674	Pleckstrin homology-like domain, family B, member 2a. (101 aa)
	ENSTRUP00000043661	Chondroadherin-like b. (653 aa)
	LOC101064868	Elastin microfibril interfacer 1a. (1064 aa)
	ENSTRUP00000051512	Uncharacterized protein. (231 aa)
	LOC101073584	Peptidase S72 domain-containing protein. (909 aa)
	ddr1	Discoidin domain receptor tyrosine kinase 1. (879 aa)
	LOC101078769	PH domain-containing protein. (1399 aa)
	abl1	Tyrosine-protein kinase. (1115 aa)
	LOC101075471	Pleckstrin homology-like domain, family B, member 1a. (1266 aa)
	LOC101064431	Discoidin domain receptor family, member 2, like. (889 aa)
	ddr2	Discoidin domain receptor tyrosine kinase 2a. (869 aa)
	H2RVP2_TAKRU	Uncharacterized protein. (116 aa)
	tnfrsf1a-2	Tumor necrosis factor receptor superfamily, member 1a. (378 aa)
	LOC101079402	Tyrosine-protein kinase receptor. (879 aa)
	LOC101069848	Retinoblastoma-associated protein. (913 aa)
	ENSTRUP00000081887	annotation not available (764 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101069848	abl1	ENSTRUP00000081329	ENSTRUP00000061821	Retinoblastoma-associated protein.	Tyrosine-protein kinase.	0.403
LOC101069848	abl2	ENSTRUP00000081329	ENSTRUP00000014750	Retinoblastoma-associated protein.	Tyrosine-protein kinase.	0.403
LOC101073584	LOC101078584	ENSTRUP00000057188	ENSTRUP00000005991	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.902
LOC101078584	LOC101073584	ENSTRUP00000005991	ENSTRUP00000057188	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.902
LOC115246431	abl1	ENSTRUP00000040486	ENSTRUP00000061821	Retinoblastoma 1.	Tyrosine-protein kinase.	0.937
LOC115246431	abl2	ENSTRUP00000040486	ENSTRUP00000014750	Retinoblastoma 1.	Tyrosine-protein kinase.	0.403
abl1	LOC101069848	ENSTRUP00000061821	ENSTRUP00000081329	Tyrosine-protein kinase.	Retinoblastoma-associated protein.	0.403
abl1	LOC115246431	ENSTRUP00000061821	ENSTRUP00000040486	Tyrosine-protein kinase.	Retinoblastoma 1.	0.937
abl1	abl2	ENSTRUP00000061821	ENSTRUP00000014750	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.914
abl2	LOC101069848	ENSTRUP00000014750	ENSTRUP00000081329	Tyrosine-protein kinase.	Retinoblastoma-associated protein.	0.403
abl2	LOC115246431	ENSTRUP00000014750	ENSTRUP00000040486	Tyrosine-protein kinase.	Retinoblastoma 1.	0.403
abl2	abl1	ENSTRUP00000014750	ENSTRUP00000061821	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.914
tnfrsf14	tnfrsf1a	ENSTRUP00000037805	ENSTRUP00000011080	Tumor necrosis factor receptor superfamily, member 1B.	Tumor necrosis factor receptor superfamily member 1A.	0.610
tnfrsf14	tnfrsf1a-2	ENSTRUP00000037805	ENSTRUP00000074097	Tumor necrosis factor receptor superfamily, member 1B.	Tumor necrosis factor receptor superfamily, member 1a.	0.610
tnfrsf1a	tnfrsf14	ENSTRUP00000011080	ENSTRUP00000037805	Tumor necrosis factor receptor superfamily member 1A.	Tumor necrosis factor receptor superfamily, member 1B.	0.610
tnfrsf1a	tnfrsf1a-2	ENSTRUP00000011080	ENSTRUP00000074097	Tumor necrosis factor receptor superfamily member 1A.	Tumor necrosis factor receptor superfamily, member 1a.	0.900
tnfrsf1a-2	tnfrsf14	ENSTRUP00000074097	ENSTRUP00000037805	Tumor necrosis factor receptor superfamily, member 1a.	Tumor necrosis factor receptor superfamily, member 1B.	0.610
tnfrsf1a-2	tnfrsf1a	ENSTRUP00000074097	ENSTRUP00000011080	Tumor necrosis factor receptor superfamily, member 1a.	Tumor necrosis factor receptor superfamily member 1A.	0.900