28 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wac	WW domain containing adaptor with coiled-coil a. (589 aa)
	e2f7	E2F transcription factor 7. (745 aa)
	crlf3	Cytokine receptor-like factor 3. (445 aa)
	H2SD17_TAKRU	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1. (329 aa)
	rbl1	Retinoblastoma-like 1 (p107). (1045 aa)
	pidd1	P53-induced death domain protein 1. (885 aa)
	brd7	Bromodomain containing 7. (618 aa)
	LOC101078351	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b. (276 aa)
	kank2	KN motif and ankyrin repeat domains 2. (1047 aa)
	LOC101070901	Retinoblastoma-like 2 (p130). (1084 aa)
	prmt2	Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (419 aa)
	casp2	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (449 aa)
	ccnd1	Cyclin D1. (292 aa)
	LOC115246431	Retinoblastoma 1. (913 aa)
	rfwd3	Ring finger and WD repeat domain 3. (588 aa)
	prkdc	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4112 aa)
	LOC101066941	FCP1 homology domain-containing protein. (262 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (567 aa)
	ENSTRUP00000054856	CASP2 and RIPK1 domain containing adaptor with death domain. (114 aa)
	dcun1d3	DCN1-like protein. (324 aa)
	fbxo7	F-box protein 7. (124 aa)
	LOC101075170	Four and a half LIM domains 1b. (371 aa)
	ctdspl	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a. (346 aa)
	LOC101078127	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2. (260 aa)
	fbxo31	F-box protein 31. (578 aa)
	LOC101072071	WW domain-containing protein. (530 aa)
	LOC101069848	Retinoblastoma-associated protein. (913 aa)
	fhl1	Four and a half LIM domains 1a. (297 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000054856	casp2	ENSTRUP00000054856	ENSTRUP00000037606	CASP2 and RIPK1 domain containing adaptor with death domain.	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.953
ENSTRUP00000054856	pidd1	ENSTRUP00000054856	ENSTRUP00000017044	CASP2 and RIPK1 domain containing adaptor with death domain.	P53-induced death domain protein 1.	0.985
LOC101069848	ccnd1	ENSTRUP00000081329	ENSTRUP00000040259	Retinoblastoma-associated protein.	Cyclin D1.	0.819
LOC101069848	e2f7	ENSTRUP00000081329	ENSTRUP00000004256	Retinoblastoma-associated protein.	E2F transcription factor 7.	0.461
LOC101070901	LOC115246431	ENSTRUP00000031719	ENSTRUP00000040486	Retinoblastoma-like 2 (p130).	Retinoblastoma 1.	0.935
LOC101070901	ccnd1	ENSTRUP00000031719	ENSTRUP00000040259	Retinoblastoma-like 2 (p130).	Cyclin D1.	0.978
LOC101070901	e2f7	ENSTRUP00000031719	ENSTRUP00000004256	Retinoblastoma-like 2 (p130).	E2F transcription factor 7.	0.463
LOC101070901	rbl1	ENSTRUP00000031719	ENSTRUP00000012287	Retinoblastoma-like 2 (p130).	Retinoblastoma-like 1 (p107).	0.911
LOC101072071	cdc73	ENSTRUP00000071980	ENSTRUP00000054471	WW domain-containing protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.591
LOC115246431	LOC101070901	ENSTRUP00000040486	ENSTRUP00000031719	Retinoblastoma 1.	Retinoblastoma-like 2 (p130).	0.935
LOC115246431	ccnd1	ENSTRUP00000040486	ENSTRUP00000040259	Retinoblastoma 1.	Cyclin D1.	0.981
LOC115246431	e2f7	ENSTRUP00000040486	ENSTRUP00000004256	Retinoblastoma 1.	E2F transcription factor 7.	0.461
LOC115246431	rbl1	ENSTRUP00000040486	ENSTRUP00000012287	Retinoblastoma 1.	Retinoblastoma-like 1 (p107).	0.935
casp2	ENSTRUP00000054856	ENSTRUP00000037606	ENSTRUP00000054856	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	CASP2 and RIPK1 domain containing adaptor with death domain.	0.953
casp2	pidd1	ENSTRUP00000037606	ENSTRUP00000017044	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	P53-induced death domain protein 1.	0.885
ccnd1	LOC101069848	ENSTRUP00000040259	ENSTRUP00000081329	Cyclin D1.	Retinoblastoma-associated protein.	0.819
ccnd1	LOC101070901	ENSTRUP00000040259	ENSTRUP00000031719	Cyclin D1.	Retinoblastoma-like 2 (p130).	0.978
ccnd1	LOC115246431	ENSTRUP00000040259	ENSTRUP00000040486	Cyclin D1.	Retinoblastoma 1.	0.981
ccnd1	cdc73	ENSTRUP00000040259	ENSTRUP00000054471	Cyclin D1.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.450
ccnd1	fbxo31	ENSTRUP00000040259	ENSTRUP00000070651	Cyclin D1.	F-box protein 31.	0.544