9 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hspb1	Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (200 aa)
	LOC101067940	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
	LOC101071528	Macrophage stimulating 1 receptor a. (1375 aa)
	mst1r	Macrophage stimulating 1 receptor b. (1374 aa)
	LOC101067042	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (209 aa)
	fgf16	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (217 aa)
	lgmn	Legumain. (545 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (218 aa)
	met	Uncharacterized protein. (1425 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101067042	fgf16	ENSTRUP00000049123	ENSTRUP00000053768	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.465
LOC101067042	met	ENSTRUP00000049123	ENSTRUP00000078415	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.695
LOC101067940	fgf16	ENSTRUP00000003093	ENSTRUP00000053768	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.465
LOC101067940	met	ENSTRUP00000003093	ENSTRUP00000078415	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.695
LOC101071528	met	ENSTRUP00000025241	ENSTRUP00000078415	Macrophage stimulating 1 receptor a.	Uncharacterized protein.	0.677
LOC101071528	mst1r	ENSTRUP00000025241	ENSTRUP00000035729	Macrophage stimulating 1 receptor a.	Macrophage stimulating 1 receptor b.	0.683
fgf16	LOC101067042	ENSTRUP00000053768	ENSTRUP00000049123	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.465
fgf16	LOC101067940	ENSTRUP00000053768	ENSTRUP00000003093	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.465
fgf16	met	ENSTRUP00000053768	ENSTRUP00000078415	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.680
met	LOC101067042	ENSTRUP00000078415	ENSTRUP00000049123	Uncharacterized protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.695
met	LOC101067940	ENSTRUP00000078415	ENSTRUP00000003093	Uncharacterized protein.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.695
met	LOC101071528	ENSTRUP00000078415	ENSTRUP00000025241	Uncharacterized protein.	Macrophage stimulating 1 receptor a.	0.677
met	fgf16	ENSTRUP00000078415	ENSTRUP00000053768	Uncharacterized protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.680
met	mst1r	ENSTRUP00000078415	ENSTRUP00000035729	Uncharacterized protein.	Macrophage stimulating 1 receptor b.	0.677
mst1r	LOC101071528	ENSTRUP00000035729	ENSTRUP00000025241	Macrophage stimulating 1 receptor b.	Macrophage stimulating 1 receptor a.	0.683
mst1r	met	ENSTRUP00000035729	ENSTRUP00000078415	Macrophage stimulating 1 receptor b.	Uncharacterized protein.	0.677