STRINGSTRING
apoe1 apoe1 apoA-IV4 apoA-IV4 apoa-iv3 apoa-iv3 LOC101072945 LOC101072945 prelid1 prelid1 atp8a1 atp8a1 LOC101074300 LOC101074300 apoe2 apoe2 atp8a2 atp8a2 apoa-i apoa-i
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
apoe1Uncharacterized protein. (247 aa)
apoA-IV4Apolipoprotein A-IV4. (255 aa)
apoa-iv3Uncharacterized protein. (255 aa)
LOC101072945PRELI/MSF1 domain-containing protein. (209 aa)
prelid1PRELI domain containing 1a. (210 aa)
atp8a1Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1165 aa)
LOC101074300Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (260 aa)
apoe2Apolipoprotein E2. (276 aa)
atp8a2Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1213 aa)
apoa-iUncharacterized protein. (263 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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