25 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rps23	Small subunit ribosomal protein S23e. (154 aa)
	ENSTRUP00000079751	annotation not available (219 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (155 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (187 aa)
	RPS17	Ribosomal protein S17. (135 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	rps19	Ribosomal protein S19. (200 aa)
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (198 aa)
	RPS20	Ribosomal protein S20. (195 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	LOC101074802	Uncharacterized protein. (128 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (144 aa)
	RPS29	Ribosomal protein S29. (100 aa)
	Rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (111 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	mcts1	Malignant T-cell-amplified sequence. (181 aa)
	H2TER7_TAKRU	Ribosomal protein S28. (53 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	LOC101069505	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (306 aa)
	Rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (85 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1414 aa)
	LOC101061501	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (242 aa)
	LOC101069523	40S ribosomal protein S20. (127 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX29	H2TER7_TAKRU	ENSTRUP00000068521	ENSTRUP00000023160	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S28.	0.425
DHX29	rps11	ENSTRUP00000068521	ENSTRUP00000068429	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.435
DHX29	rps2	ENSTRUP00000068521	ENSTRUP00000016765	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.464
DHX29	rps24	ENSTRUP00000068521	ENSTRUP00000082261	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.425
DHX29	rps3a	ENSTRUP00000068521	ENSTRUP00000038638	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.427
DHX29	rps6	ENSTRUP00000068521	ENSTRUP00000053579	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.591
DHX29	rps7	ENSTRUP00000068521	ENSTRUP00000057373	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.587
ENSTRUP00000079751	H2TER7_TAKRU	ENSTRUP00000079751	ENSTRUP00000023160	annotation not available	Ribosomal protein S28.	0.995
ENSTRUP00000079751	LOC101069505	ENSTRUP00000079751	ENSTRUP00000010856	annotation not available	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.995
ENSTRUP00000079751	LOC101069523	ENSTRUP00000079751	ENSTRUP00000076506	annotation not available	40S ribosomal protein S20.	0.979
ENSTRUP00000079751	LOC101074802	ENSTRUP00000079751	ENSTRUP00000042490	annotation not available	Uncharacterized protein.	0.977
ENSTRUP00000079751	RPS17	ENSTRUP00000079751	ENSTRUP00000063959	annotation not available	Ribosomal protein S17.	0.994
ENSTRUP00000079751	RPS20	ENSTRUP00000079751	ENSTRUP00000056495	annotation not available	Ribosomal protein S20.	0.979
ENSTRUP00000079751	RPS29	ENSTRUP00000079751	ENSTRUP00000031229	annotation not available	Ribosomal protein S29.	0.995
ENSTRUP00000079751	Rps23	ENSTRUP00000079751	ENSTRUP00000077931	annotation not available	Small subunit ribosomal protein S23e.	0.995
ENSTRUP00000079751	Rps25	ENSTRUP00000079751	ENSTRUP00000001294	annotation not available	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.995
ENSTRUP00000079751	Rps26	ENSTRUP00000079751	ENSTRUP00000030482	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.994
ENSTRUP00000079751	fau	ENSTRUP00000079751	ENSTRUP00000029977	annotation not available	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSTRUP00000079751	mcts1	ENSTRUP00000079751	ENSTRUP00000024311	annotation not available	Malignant T-cell-amplified sequence.	0.533
ENSTRUP00000079751	rps11	ENSTRUP00000079751	ENSTRUP00000068429	annotation not available	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.995