STRINGSTRING
ENSTRUP00000054366 ENSTRUP00000054366 rrp7a rrp7a RBMS3 RBMS3 LOC101065682 LOC101065682 rbm33 rbm33 LOC105417833 LOC105417833 dazl dazl LOC101077619 LOC101077619 hnrnph1 hnrnph1 LOC101076487 LOC101076487 zrsr2 zrsr2 LOC115247216 LOC115247216 rbm25 rbm25 LOC101076881 LOC101076881 scaf4 scaf4 syncrip syncrip LOC101067722 LOC101067722 LOC101076679 LOC101076679 slirp slirp LOC101070979 LOC101070979 sf3b6 sf3b6 rbms1 rbms1 LOC101079154 LOC101079154 RBM20 RBM20 LOC101066421 LOC101066421 ncoa5 ncoa5 LOC101070858 LOC101070858 ssb ssb LOC101079760 LOC101079760 u2surp u2surp sltm sltm hnrnpa3 hnrnpa3 srsf11 srsf11 CPSF7 CPSF7 LOC101066595 LOC101066595 LOC101076124 LOC101076124 zcrb1 zcrb1 cpeb1 cpeb1 cpsf6 cpsf6 tut1 tut1 LOC101076153 LOC101076153 rbm19 rbm19 LOC101078929 LOC101078929 grsf1 grsf1 TRA2B TRA2B LOC101078534 LOC101078534 LOC101072348 LOC101072348 LOC101074980 LOC101074980 nup35 nup35 dnajc17 dnajc17 LOC101075814 LOC101075814 trmt2a trmt2a enox2 enox2 htatsf1 htatsf1 LOC101061268 LOC101061268 LOC101061042 LOC101061042 rbm28 rbm28 ralyl ralyl rbm8a rbm8a rbm48 rbm48 pabpc1 pabpc1 g3bp2 g3bp2 ptbp1 ptbp1 rbm39 rbm39 LOC101071804 LOC101071804 rbm34 rbm34 LOC101075802 LOC101075802 LOC101068848 LOC101068848 H2TR56_TAKRU H2TR56_TAKRU srsf5 srsf5 LOC101077689 LOC101077689 srsf7 srsf7 MARF1 MARF1 eif4h eif4h LOC115247179 LOC115247179 rbm24 rbm24 snrpa snrpa LOC101065611 LOC101065611 esrp1 esrp1 snrnp70 snrnp70 raver1 raver1 dnd1 dnd1 snrpb2 snrpb2 LOC101071878 LOC101071878 ALYREF ALYREF hnrnpr hnrnpr rnps1 rnps1 LOC101076059 LOC101076059 rbm5 rbm5 ncl ncl LOC101064111 LOC101064111 EIF3G EIF3G H2T4D8_TAKRU H2T4D8_TAKRU rbfox2 rbfox2 LOC101078280 LOC101078280 alkbh8 alkbh8 H2SWV4_TAKRU H2SWV4_TAKRU ppil4 ppil4 pabpn1 pabpn1 ppie ppie rbmx rbmx rbm18 rbm18 LOC101079487 LOC101079487 nono nono rbm45 rbm45 PUF60 PUF60 mcm3ap mcm3ap nifk nifk rbm22 rbm22 rbm27 rbm27 sf3b4 sf3b4 cstf2 cstf2 LOC101078197 LOC101078197 srsf1 srsf1 LOC101068864 LOC101068864 H2S3D1_TAKRU H2S3D1_TAKRU rbm15 rbm15 abt1 abt1 a1cf a1cf rbmx2 rbmx2 H2RMX1_TAKRU H2RMX1_TAKRU LOC101073322 LOC101073322 elavl3 elavl3 hnrnpm hnrnpm LOC101064820 LOC101064820 u2af2 u2af2 msi2 msi2 H2T1J8_TAKRU H2T1J8_TAKRU CELF2 CELF2 CPEB4 CPEB4 LOC101071215 LOC101071215 LOC101079762 LOC101079762 LOC101062720 LOC101062720 LOC101076299 LOC101076299 LOC101073230 LOC101073230 celf5 celf5 LOC101078375 LOC101078375 LOC101062289 LOC101062289 rbm47 rbm47 TIAL1 TIAL1 LOC101073060 LOC101073060 PTBP3 PTBP3 pprc1 pprc1 LOC101076201 LOC101076201 H2S5D4_TAKRU H2S5D4_TAKRU cnot4 cnot4 LOC101074005 LOC101074005 LOC101071976 LOC101071976 rbm17 rbm17 LOC101069052 LOC101069052 SRSF3 SRSF3 ENSTRUP00000056044 ENSTRUP00000056044 ewsr1 ewsr1 LOC101069501 LOC101069501 LOC101079826 LOC101079826 rbm26 rbm26 LOC101077690 LOC101077690 LOC101073295 LOC101073295 igf2bp2 igf2bp2 H2S9F5_TAKRU H2S9F5_TAKRU hnrnpl hnrnpl LOC101079650 LOC101079650 RBM38 RBM38 cpeb2 cpeb2 LOC101063464 LOC101063464 LOC101061383 LOC101061383 TIA1 TIA1 rnpc3 rnpc3 sart3 sart3 celf4 celf4 ncbp2 ncbp2 rbpms2 rbpms2 dazap1 dazap1 LOC101065658 LOC101065658 HNRNPH3 HNRNPH3 LOC101078925 LOC101078925 eif4b eif4b synj1 synj1 cpeb3 cpeb3 elavl4 elavl4 LOC101079913 LOC101079913
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSTRUP00000054366RRM domain-containing protein. (145 aa)
rrp7aRibosomal RNA processing 7 homolog A. (281 aa)
RBMS3RNA binding motif single stranded interacting protein 3. (426 aa)
LOC101065682Heterogeneous nuclear ribonucleoprotein A/Ba. (320 aa)
rbm33RNA binding motif protein 33a. (1210 aa)
LOC105417833RRM domain-containing protein. (125 aa)
dazlDeleted in azoospermia-like. (227 aa)
LOC101077619Uncharacterized protein. (326 aa)
hnrnph1Heterogeneous nuclear ribonucleoprotein H1. (406 aa)
LOC101076487RRM domain-containing protein. (1001 aa)
zrsr2U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein. (605 aa)
LOC115247216Si:dkey-33c12.4. (649 aa)
rbm25RNA binding motif protein 25b. (798 aa)
LOC101076881Uncharacterized protein. (343 aa)
scaf4SR-related CTD-associated factor 4a. (1162 aa)
syncripSynaptotagmin binding, cytoplasmic RNA interacting protein, like. (578 aa)
LOC101067722Si:ch1073-335m2.2. (3242 aa)
LOC101076679tRNA selenocysteine 1 associated protein 1b. (341 aa)
slirpSRA stem-loop interacting RNA binding protein. (141 aa)
LOC101070979RNA binding motif protein 7. (253 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
rbms1RNA binding motif, single stranded interacting protein 1a. (374 aa)
LOC101079154Uncharacterized protein. (186 aa)
RBM20RNA binding motif protein 20. (1130 aa)
LOC101066421Heterogeneous nuclear ribonucleoprotein D. (314 aa)
ncoa5Nuclear receptor coactivator 5. (635 aa)
LOC101070858Serine and arginine rich splicing factor 2a. (229 aa)
ssbSmall RNA binding exonuclease protection factor La. (396 aa)
LOC101079760Serine and arginine rich splicing factor 5b. (310 aa)
u2surpU2 snRNP-associated SURP domain containing. (982 aa)
sltmSAFB-like, transcription modulator. (1025 aa)
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (336 aa)
srsf11Serine and arginine rich splicing factor 11. (484 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (447 aa)
LOC101066595Uncharacterized protein. (238 aa)
LOC101076124Uncharacterized protein. (515 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (216 aa)
cpeb1Cytoplasmic polyadenylation element binding protein 1b. (572 aa)
cpsf6Cleavage and polyadenylation specific factor 6. (560 aa)
tut1Terminal uridylyl transferase 1, U6 snRNA-specific. (796 aa)
LOC101076153Musashi RNA binding protein 1. (348 aa)
rbm19RNA binding motif protein 19. (941 aa)
LOC101078929Uncharacterized protein. (309 aa)
grsf1G-rich RNA sequence binding factor 1. (386 aa)
TRA2BTransformer 2 beta homolog. (263 aa)
LOC101078534RNA binding motif protein 24b. (290 aa)
LOC101072348Synaptotagmin binding, cytoplasmic RNA interacting protein. (633 aa)
LOC101074980Cugbp, Elav-like family member 3b. (457 aa)
nup35Nucleoporin 35. (291 aa)
dnajc17DnaJ (Hsp40) homolog, subfamily C, member 17. (306 aa)
LOC101075814RNA binding motif protein 12B. (627 aa)
trmt2atRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (617 aa)
enox2Ecto-NOX disulfide-thiol exchanger 2. (684 aa)
htatsf1HIV-1 Tat specific factor 1. (439 aa)
LOC101061268RNA binding motif protein 4.1. (416 aa)
LOC101061042RNA binding motif protein 4.2. (379 aa)
rbm28RNA binding motif protein 28. (732 aa)
ralylUncharacterized protein. (293 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (173 aa)
rbm48RNA binding motif protein 48. (351 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (640 aa)
g3bp2Zgc:56304. (504 aa)
ptbp1Polypyrimidine tract binding protein 1a. (562 aa)
rbm39RNA binding motif protein 39b. (412 aa)
LOC101071804Paraspeckle component 1. (515 aa)
rbm34RNA binding motif protein 34. (407 aa)
LOC101075802Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (618 aa)
LOC101068848Cytoplasmic polyadenylation element binding protein 4a. (744 aa)
H2TR56_TAKRURRM domain-containing protein. (440 aa)
srsf5Serine and arginine rich splicing factor 5a. (296 aa)
LOC101077689U2 small nuclear RNA auxiliary factor 1. (231 aa)
srsf7Serine and arginine rich splicing factor 7a. (252 aa)
MARF1Meiosis regulator and mRNA stability factor 1. (1769 aa)
eif4hEukaryotic translation initiation factor 4h. (184 aa)
LOC115247179Uncharacterized protein. (584 aa)
rbm24RNA binding motif protein 24a. (232 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (273 aa)
LOC101065611Uncharacterized protein. (452 aa)
esrp1Epithelial splicing regulatory protein 1. (781 aa)
snrnp70Small nuclear ribonucleoprotein 70 (U1). (467 aa)
raver1Ribonucleoprotein, PTB-binding 1. (732 aa)
dnd1Uncharacterized protein. (362 aa)
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (219 aa)
LOC101071878SET domain containing 1A, histone lysine methyltransferase. (2178 aa)
ALYREFAly/REF export factor. (267 aa)
hnrnprHeterogeneous nuclear ribonucleoprotein R. (618 aa)
rnps1RNA binding protein S1, serine-rich domain. (282 aa)
LOC101076059Uncharacterized protein. (328 aa)
rbm5RNA binding motif protein 5. (842 aa)
nclNucleolin. (675 aa)
LOC101064111Epithelial splicing regulatory protein 2. (740 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (291 aa)
H2T4D8_TAKRURNA binding motif protein 15. (831 aa)
rbfox2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (153 aa)
LOC101078280ELAV-like protein; Belongs to the RRM elav family. (358 aa)
alkbh8AlkB homolog 8, tRNA methyltransferase. (708 aa)
H2SWV4_TAKRURRM domain-containing protein. (486 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (440 aa)
pabpn1Poly(A) binding protein, nuclear 1. (232 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (304 aa)
rbmxRNA binding motif protein X-linked. (391 aa)
rbm18RNA binding motif protein 18. (198 aa)
LOC101079487Uncharacterized protein. (568 aa)
nonoNon-POU domain containing, octamer-binding. (443 aa)
rbm45RNA binding motif protein 45. (463 aa)
PUF60Poly-U binding splicing factor b. (551 aa)
mcm3apMinichromosome maintenance complex component 3 associated protein. (1666 aa)
nifkNucleolar protein interacting with the FHA domain of MKI67. (286 aa)
rbm22RNA binding motif protein 22. (428 aa)
rbm27RNA binding motif protein 27. (1027 aa)
sf3b4Splicing factor 3b, subunit 4. (397 aa)
cstf2RRM domain-containing protein. (528 aa)
LOC101078197RALY RNA binding protein like. (293 aa)
srsf1Serine and arginine rich splicing factor 1a. (245 aa)
LOC101068864Scaffold attachment factor B. (816 aa)
H2S3D1_TAKRURRM domain-containing protein. (127 aa)
rbm15RNA binding motif protein 15. (845 aa)
abt1Activator of basal transcription 1. (282 aa)
a1cfApobec1 complementation factor. (613 aa)
rbmx2RNA binding motif protein X-linked 2. (329 aa)
H2RMX1_TAKRURRM domain-containing protein. (98 aa)
LOC101073322Uncharacterized protein. (537 aa)
elavl3ELAV-like protein; Belongs to the RRM elav family. (387 aa)
hnrnpmHeterogeneous nuclear ribonucleoprotein M. (690 aa)
LOC101064820Cugbp, Elav-like family member 1. (509 aa)
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (514 aa)
msi2Musashi RNA-binding protein 2a. (434 aa)
H2T1J8_TAKRURNA binding motif single stranded interacting protein 3. (436 aa)
CELF2Cugbp, Elav-like family member 2. (544 aa)
CPEB4Cytoplasmic polyadenylation element binding protein 4. (776 aa)
LOC101071215Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (643 aa)
LOC101079762Trinucleotide repeat containing adaptor 6C2. (1572 aa)
LOC101062720Uncharacterized protein. (540 aa)
LOC101076299RNA binding motif, single stranded interacting protein 2a. (405 aa)
LOC101073230Si:dkey-205h23.2. (510 aa)
celf5Cugbp, Elav-like family member 5a. (489 aa)
LOC101078375RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (381 aa)
LOC101062289Cytotoxic granule-associated RNA binding protein 1, like. (386 aa)
rbm47RNA binding motif protein 47. (610 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (451 aa)
LOC101073060RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (417 aa)
PTBP3Polypyrimidine tract binding protein 3. (546 aa)
pprc1PPARG related coactivator 1. (1272 aa)
LOC101076201Insulin-like growth factor 2 mRNA binding protein 3. (605 aa)
H2S5D4_TAKRURRM domain-containing protein. (354 aa)
cnot4CCR4-NOT transcription complex, subunit 4a. (837 aa)
LOC101074005Apoptotic chromatin condensation inducer 1b. (985 aa)
LOC101071976RNA binding motif protein 6. (1291 aa)
rbm17RNA binding motif protein 17. (431 aa)
LOC101069052RRM domain-containing protein. (260 aa)
SRSF3Serine and arginine rich splicing factor 3. (173 aa)
ENSTRUP00000056044Uncharacterized protein. (264 aa)
ewsr1EWS RNA-binding protein 1b. (599 aa)
LOC101069501Spen family transcriptional repressor. (3518 aa)
LOC101079826ELAV like neuron-specific RNA binding protein 2. (408 aa)
rbm26RNA binding motif protein 26. (1004 aa)
LOC101077690RNA binding motif single stranded interacting protein 1. (439 aa)
LOC101073295RNA binding motif protein 4.3. (377 aa)
igf2bp2Insulin-like growth factor 2 mRNA binding protein 2a. (607 aa)
H2S9F5_TAKRURRM domain-containing protein. (139 aa)
hnrnplHeterogeneous nuclear ribonucleoprotein L. (569 aa)
LOC101079650RNA binding motif, single stranded interacting protein 2b. (441 aa)
RBM38RNA binding motif protein 38. (245 aa)
cpeb2Cytoplasmic polyadenylation element binding protein 2. (795 aa)
LOC101063464Uncharacterized protein. (470 aa)
LOC101061383RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (382 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (394 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (515 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (933 aa)
celf4CUGBP, Elav-like family member 4. (481 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (173 aa)
rbpms2RNA binding protein, mRNA processing factor 2b. (290 aa)
dazap1DAZ associated protein 1. (435 aa)
LOC101065658Uncharacterized protein. (232 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (464 aa)
LOC101078925Cugbp, Elav-like family member 3a. (481 aa)
eif4bEukaryotic translation initiation factor 4Bb. (673 aa)
synj1Synaptojanin 1. (1622 aa)
cpeb3Cytoplasmic polyadenylation element binding protein 3. (669 aa)
elavl4ELAV-like protein; Belongs to the RRM elav family. (473 aa)
LOC101079913RNA binding motif protein 14a. (571 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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