15 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101068009	Troponin I4b, tandem duplicate 2. (176 aa)
	ENSTRUP00000057195	Troponin T2c, cardiac. (275 aa)
	LOC115250956	Troponin I2, fast skeletal type. (171 aa)
	LOC101062247	Troponin I type 2a (skeletal, fast), tandem duplicate 2. (174 aa)
	LOC101068925	Uncharacterized protein. (300 aa)
	H2UG40_TAKRU	Troponin T type 1 (skeletal, slow). (231 aa)
	LOC101062822	Troponin T1, slow skeletal type. (287 aa)
	tnnt2	Troponin T type 2a (cardiac). (299 aa)
	tnni1	Troponin I type 1a (skeletal, slow). (170 aa)
	TNNI2	Troponin I type 2b (skeletal, fast), tandem duplicate 1. (189 aa)
	LOC101065088	Uncharacterized protein. (218 aa)
	LOC101061570	Troponin T type 3a (skeletal, fast). (272 aa)
	LOC101076809	Uncharacterized protein. (182 aa)
	LOC101074122	Uncharacterized protein. (232 aa)
	H2V1W2_TAKRU	Troponin I4b, tandem duplicate 2. (169 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000057195	H2V1W2_TAKRU	ENSTRUP00000057195	ENSTRUP00000043191	Troponin T2c, cardiac.	Troponin I4b, tandem duplicate 2.	0.816
ENSTRUP00000057195	LOC101062247	ENSTRUP00000057195	ENSTRUP00000078220	Troponin T2c, cardiac.	Troponin I type 2a (skeletal, fast), tandem duplicate 2.	0.737
ENSTRUP00000057195	LOC101065088	ENSTRUP00000057195	ENSTRUP00000039807	Troponin T2c, cardiac.	Uncharacterized protein.	0.795
ENSTRUP00000057195	LOC101068009	ENSTRUP00000057195	ENSTRUP00000043188	Troponin T2c, cardiac.	Troponin I4b, tandem duplicate 2.	0.816
ENSTRUP00000057195	LOC101076809	ENSTRUP00000057195	ENSTRUP00000042537	Troponin T2c, cardiac.	Uncharacterized protein.	0.804
ENSTRUP00000057195	LOC115250956	ENSTRUP00000057195	ENSTRUP00000063098	Troponin T2c, cardiac.	Troponin I2, fast skeletal type.	0.804
ENSTRUP00000057195	TNNI2	ENSTRUP00000057195	ENSTRUP00000038423	Troponin T2c, cardiac.	Troponin I type 2b (skeletal, fast), tandem duplicate 1.	0.804
ENSTRUP00000057195	tnni1	ENSTRUP00000057195	ENSTRUP00000030689	Troponin T2c, cardiac.	Troponin I type 1a (skeletal, slow).	0.905
H2UG40_TAKRU	H2V1W2_TAKRU	ENSTRUP00000074604	ENSTRUP00000043191	Troponin T type 1 (skeletal, slow).	Troponin I4b, tandem duplicate 2.	0.816
H2UG40_TAKRU	LOC101061570	ENSTRUP00000074604	ENSTRUP00000042496	Troponin T type 1 (skeletal, slow).	Troponin T type 3a (skeletal, fast).	0.438
H2UG40_TAKRU	LOC101062247	ENSTRUP00000074604	ENSTRUP00000078220	Troponin T type 1 (skeletal, slow).	Troponin I type 2a (skeletal, fast), tandem duplicate 2.	0.737
H2UG40_TAKRU	LOC101065088	ENSTRUP00000074604	ENSTRUP00000039807	Troponin T type 1 (skeletal, slow).	Uncharacterized protein.	0.836
H2UG40_TAKRU	LOC101068009	ENSTRUP00000074604	ENSTRUP00000043188	Troponin T type 1 (skeletal, slow).	Troponin I4b, tandem duplicate 2.	0.852
H2UG40_TAKRU	LOC101068925	ENSTRUP00000074604	ENSTRUP00000066018	Troponin T type 1 (skeletal, slow).	Uncharacterized protein.	0.436
H2UG40_TAKRU	LOC101076809	ENSTRUP00000074604	ENSTRUP00000042537	Troponin T type 1 (skeletal, slow).	Uncharacterized protein.	0.804
H2UG40_TAKRU	LOC115250956	ENSTRUP00000074604	ENSTRUP00000063098	Troponin T type 1 (skeletal, slow).	Troponin I2, fast skeletal type.	0.804
H2UG40_TAKRU	TNNI2	ENSTRUP00000074604	ENSTRUP00000038423	Troponin T type 1 (skeletal, slow).	Troponin I type 2b (skeletal, fast), tandem duplicate 1.	0.837
H2UG40_TAKRU	tnni1	ENSTRUP00000074604	ENSTRUP00000030689	Troponin T type 1 (skeletal, slow).	Troponin I type 1a (skeletal, slow).	0.916
H2UG40_TAKRU	tnnt2	ENSTRUP00000074604	ENSTRUP00000029972	Troponin T type 1 (skeletal, slow).	Troponin T type 2a (cardiac).	0.444
H2V1W2_TAKRU	ENSTRUP00000057195	ENSTRUP00000043191	ENSTRUP00000057195	Troponin I4b, tandem duplicate 2.	Troponin T2c, cardiac.	0.816