24 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	plxna4	Plexin A4. (1913 aa)
	atrn	Attractin. (1382 aa)
	LOC101062443	Plexin A1. (1896 aa)
	LOC101070481	Plexin domain containing 1. (480 aa)
	LOC101066092	Uncharacterized protein; Belongs to the semaphorin family. (883 aa)
	LOC101076448	Sema domain-containing protein; Belongs to the semaphorin family. (918 aa)
	LOC101076911	Semaphorin 4e; Belongs to the semaphorin family. (730 aa)
	LOC101068409	Plexin b2a. (1556 aa)
	plxdc2	Plexin domain containing 2. (528 aa)
	LOC101071528	Macrophage stimulating 1 receptor a. (1375 aa)
	PLXND1	Plexin D1. (1802 aa)
	plxna3	Plexin A3. (1910 aa)
	sema4c	Uncharacterized protein; Belongs to the semaphorin family. (864 aa)
	LOC101071388	Si:ch211-129c21.1; Belongs to the semaphorin family. (803 aa)
	plxna2	Plexin A2. (1901 aa)
	LOC101070355	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1081 aa)
	LOC101072330	Plexin b2b. (1849 aa)
	LOC101062161	Plexin A1a. (1910 aa)
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (919 aa)
	sema4b	Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
	met	Uncharacterized protein. (1425 aa)
	LOC101062823	Attractin-like 1b. (1406 aa)
	LOC105417227	Sema domain-containing protein; Belongs to the semaphorin family. (613 aa)
	LOC101067092	Attractin-like 1a. (1397 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101062161	LOC101066092	ENSTRUP00000068851	ENSTRUP00000011855	Plexin A1a.	Uncharacterized protein; Belongs to the semaphorin family.	0.457
LOC101062161	LOC101070355	ENSTRUP00000068851	ENSTRUP00000064820	Plexin A1a.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	0.464
LOC101062161	LOC101071388	ENSTRUP00000068851	ENSTRUP00000051635	Plexin A1a.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.525
LOC101062161	LOC101071528	ENSTRUP00000068851	ENSTRUP00000025241	Plexin A1a.	Macrophage stimulating 1 receptor a.	0.428
LOC101062161	LOC101076448	ENSTRUP00000068851	ENSTRUP00000012328	Plexin A1a.	Sema domain-containing protein; Belongs to the semaphorin family.	0.457
LOC101062161	LOC101076911	ENSTRUP00000068851	ENSTRUP00000015902	Plexin A1a.	Semaphorin 4e; Belongs to the semaphorin family.	0.525
LOC101062161	LOC105417227	ENSTRUP00000068851	ENSTRUP00000083105	Plexin A1a.	Sema domain-containing protein; Belongs to the semaphorin family.	0.580
LOC101062161	SEMA4D	ENSTRUP00000068851	ENSTRUP00000069334	Plexin A1a.	Semaphorin 4D; Belongs to the semaphorin family.	0.525
LOC101062161	met	ENSTRUP00000068851	ENSTRUP00000078415	Plexin A1a.	Uncharacterized protein.	0.428
LOC101062161	sema4b	ENSTRUP00000068851	ENSTRUP00000072325	Plexin A1a.	Sema domain-containing protein; Belongs to the semaphorin family.	0.598
LOC101062161	sema4c	ENSTRUP00000068851	ENSTRUP00000035931	Plexin A1a.	Uncharacterized protein; Belongs to the semaphorin family.	0.457
LOC101062443	LOC101066092	ENSTRUP00000008385	ENSTRUP00000011855	Plexin A1.	Uncharacterized protein; Belongs to the semaphorin family.	0.457
LOC101062443	LOC101070355	ENSTRUP00000008385	ENSTRUP00000064820	Plexin A1.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	0.464
LOC101062443	LOC101071388	ENSTRUP00000008385	ENSTRUP00000051635	Plexin A1.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.525
LOC101062443	LOC101071528	ENSTRUP00000008385	ENSTRUP00000025241	Plexin A1.	Macrophage stimulating 1 receptor a.	0.428
LOC101062443	LOC101076448	ENSTRUP00000008385	ENSTRUP00000012328	Plexin A1.	Sema domain-containing protein; Belongs to the semaphorin family.	0.457
LOC101062443	LOC101076911	ENSTRUP00000008385	ENSTRUP00000015902	Plexin A1.	Semaphorin 4e; Belongs to the semaphorin family.	0.525
LOC101062443	LOC105417227	ENSTRUP00000008385	ENSTRUP00000083105	Plexin A1.	Sema domain-containing protein; Belongs to the semaphorin family.	0.580
LOC101062443	SEMA4D	ENSTRUP00000008385	ENSTRUP00000069334	Plexin A1.	Semaphorin 4D; Belongs to the semaphorin family.	0.525
LOC101062443	met	ENSTRUP00000008385	ENSTRUP00000078415	Plexin A1.	Uncharacterized protein.	0.428