21 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101077507	Uncharacterized protein. (270 aa)
	LOC101070493	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (618 aa)
	LOC101074036	Rho family GTPase 2. (247 aa)
	RAC1	Uncharacterized protein. (214 aa)
	rhou	Uncharacterized protein. (273 aa)
	LOC101067160	Rac family small GTPase 1b. (192 aa)
	LOC101070117	Ras homolog gene family, member Aa. (193 aa)
	rhoq	Ras homolog family member Q. (207 aa)
	LOC101073689	Ras homolog family member Gb. (191 aa)
	LOC101062675	Uncharacterized protein. (249 aa)
	LOC101073210	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (694 aa)
	LOC101067723	Cell division cycle 42. (191 aa)
	LOC101071942	Uncharacterized protein. (193 aa)
	stk19	Serine/threonine kinase 19. (253 aa)
	LOC101079309	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (695 aa)
	rac2	Rac family small GTPase 2. (218 aa)
	LOC101077509	Ras homolog family member Ca. (193 aa)
	LOC101075302	Ras homolog family member F. (210 aa)
	LOC101076287	Ras homolog gene family, member Gd. (191 aa)
	LOC101076147	Uncharacterized protein. (193 aa)
	LOC101070569	Rho family GTPase 2. (232 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101067160	LOC101067723	ENSTRUP00000050549	ENSTRUP00000078989	Rac family small GTPase 1b.	Cell division cycle 42.	0.583
LOC101067160	LOC101070117	ENSTRUP00000050549	ENSTRUP00000051209	Rac family small GTPase 1b.	Ras homolog gene family, member Aa.	0.944
LOC101067160	LOC101071942	ENSTRUP00000050549	ENSTRUP00000079850	Rac family small GTPase 1b.	Uncharacterized protein.	0.466
LOC101067160	LOC101073689	ENSTRUP00000050549	ENSTRUP00000061287	Rac family small GTPase 1b.	Ras homolog family member Gb.	0.495
LOC101067160	LOC101075302	ENSTRUP00000050549	ENSTRUP00000024663	Rac family small GTPase 1b.	Ras homolog family member F.	0.423
LOC101067160	LOC101076147	ENSTRUP00000050549	ENSTRUP00000027633	Rac family small GTPase 1b.	Uncharacterized protein.	0.944
LOC101067160	LOC101076287	ENSTRUP00000050549	ENSTRUP00000024948	Rac family small GTPase 1b.	Ras homolog gene family, member Gd.	0.494
LOC101067160	LOC101077509	ENSTRUP00000050549	ENSTRUP00000087725	Rac family small GTPase 1b.	Ras homolog family member Ca.	0.467
LOC101067160	RAC1	ENSTRUP00000050549	ENSTRUP00000042931	Rac family small GTPase 1b.	Uncharacterized protein.	0.900
LOC101067723	LOC101067160	ENSTRUP00000078989	ENSTRUP00000050549	Cell division cycle 42.	Rac family small GTPase 1b.	0.583
LOC101067723	LOC101070117	ENSTRUP00000078989	ENSTRUP00000051209	Cell division cycle 42.	Ras homolog gene family, member Aa.	0.483
LOC101067723	LOC101071942	ENSTRUP00000078989	ENSTRUP00000079850	Cell division cycle 42.	Uncharacterized protein.	0.483
LOC101067723	LOC101073689	ENSTRUP00000078989	ENSTRUP00000061287	Cell division cycle 42.	Ras homolog family member Gb.	0.484
LOC101067723	LOC101075302	ENSTRUP00000078989	ENSTRUP00000024663	Cell division cycle 42.	Ras homolog family member F.	0.425
LOC101067723	LOC101076147	ENSTRUP00000078989	ENSTRUP00000027633	Cell division cycle 42.	Uncharacterized protein.	0.482
LOC101067723	LOC101076287	ENSTRUP00000078989	ENSTRUP00000024948	Cell division cycle 42.	Ras homolog gene family, member Gd.	0.484
LOC101067723	LOC101077509	ENSTRUP00000078989	ENSTRUP00000087725	Cell division cycle 42.	Ras homolog family member Ca.	0.483
LOC101067723	RAC1	ENSTRUP00000078989	ENSTRUP00000042931	Cell division cycle 42.	Uncharacterized protein.	0.583
LOC101067723	rac2	ENSTRUP00000078989	ENSTRUP00000086987	Cell division cycle 42.	Rac family small GTPase 2.	0.587
LOC101067723	rhoq	ENSTRUP00000078989	ENSTRUP00000055304	Cell division cycle 42.	Ras homolog family member Q.	0.423