STRINGSTRING
ahr1a ahr1a hif1a hif1a npas1 npas1 LOC101078561 LOC101078561 PER2 PER2 ahr2a ahr2a LOC101066852 LOC101066852 LOC101061913 LOC101061913 ENSTRUP00000063599 ENSTRUP00000063599 NPAS3 NPAS3 LOC101067536 LOC101067536 ahr2b ahr2b ahr2c ahr2c LOC101077956 LOC101077956 per1 per1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ahr1aUncharacterized protein. (975 aa)
hif1aHypoxia inducible factor 1 subunit alpha a. (763 aa)
npas1Neuronal PAS domain protein 1. (456 aa)
LOC101078561Period circadian clock 3. (1258 aa)
PER2Period circadian regulator 2. (1502 aa)
ahr2aUncharacterized protein. (929 aa)
LOC101066852Uncharacterized protein. (558 aa)
LOC101061913Period circadian clock 2. (1523 aa)
ENSTRUP00000063599Uncharacterized protein. (1317 aa)
NPAS3Neuronal PAS domain protein 3. (1043 aa)
LOC101067536Endothelial PAS domain protein 1b. (858 aa)
ahr2bPAS domain-containing protein. (980 aa)
ahr2cUncharacterized protein. (818 aa)
LOC101077956SIM bHLH transcription factor 1. (760 aa)
per1Period circadian clock 1b. (1416 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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