(5 nodes) Vitellinogen, beta-sheet N-terminal network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101072278	Uncharacterized protein. (1702 aa)
	mttp	Microsomal triglyceride transfer protein. (890 aa)
	LOC101062271	Vitellogenin 3, phosvitinless. (1252 aa)
	H2RM54_TAKRU	Vitellogenin domain-containing protein. (726 aa)
	LOC101066818	Apolipoprotein Bb, tandem duplicate 2. (3788 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2RM54_TAKRU	mttp	ENSTRUP00000001217	ENSTRUP00000035443	Vitellogenin domain-containing protein.	Microsomal triglyceride transfer protein.	0.895
LOC101062271	mttp	ENSTRUP00000009572	ENSTRUP00000035443	Vitellogenin 3, phosvitinless.	Microsomal triglyceride transfer protein.	0.812
LOC101066818	mttp	ENSTRUP00000087964	ENSTRUP00000035443	Apolipoprotein Bb, tandem duplicate 2.	Microsomal triglyceride transfer protein.	0.895
LOC101072278	mttp	ENSTRUP00000044804	ENSTRUP00000035443	Uncharacterized protein.	Microsomal triglyceride transfer protein.	0.812
mttp	H2RM54_TAKRU	ENSTRUP00000035443	ENSTRUP00000001217	Microsomal triglyceride transfer protein.	Vitellogenin domain-containing protein.	0.895
mttp	LOC101062271	ENSTRUP00000035443	ENSTRUP00000009572	Microsomal triglyceride transfer protein.	Vitellogenin 3, phosvitinless.	0.812
mttp	LOC101066818	ENSTRUP00000035443	ENSTRUP00000087964	Microsomal triglyceride transfer protein.	Apolipoprotein Bb, tandem duplicate 2.	0.895
mttp	LOC101072278	ENSTRUP00000035443	ENSTRUP00000044804	Microsomal triglyceride transfer protein.	Uncharacterized protein.	0.812