STRINGSTRING
uba52 uba52 LOC101077745 LOC101077745 ccnq ccnq rbl1 rbl1 skil skil junb junb LOC101072027 LOC101072027 irx2 irx2 LOC101070118 LOC101070118 cdk9 cdk9 e2f4 e2f4 irx5 irx5 irx6 irx6 smad7 smad7 rps27a rps27a LOC101073833 LOC101073833 nedd4l nedd4l ncor2 ncor2 H2U6V0_TAKRU H2U6V0_TAKRU tfdp1 tfdp1 men1 men1 sp1 sp1 LOC101076671 LOC101076671 ccnc ccnc SMAD4 SMAD4 parp1 parp1 mapk1 mapk1 rnf111 rnf111 LOC101068466 LOC101068466 irx3 irx3 Ccnt2 Ccnt2 CCNK CCNK LOC101067757 LOC101067757 tgif1 tgif1 LOC101066563 LOC101066563 LOC101078322 LOC101078322 snw1 snw1 smad3 smad3 Ccnt1 Ccnt1 ski ski trim33 trim33 LOC101065179 LOC101065179 kxd1 kxd1 LOC101074868 LOC101074868 LOC101072080 LOC101072080 atp1b4 atp1b4 meis1 meis1 LOC101079666 LOC101079666 LOC101072871 LOC101072871 LOC101063546 LOC101063546 ENSTRUP00000076792 ENSTRUP00000076792 ncor1 ncor1 LOC101061571 LOC101061571 LOC101078309 LOC101078309 mkx mkx ENSTRUP00000078709 ENSTRUP00000078709 ENSTRUP00000081798 ENSTRUP00000081798 cdk19 cdk19 cdk8 cdk8 meis2 meis2 LOC101077647 LOC101077647 LOC101077960 LOC101077960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC101077745E2F transcription factor 5. (362 aa)
ccnqCyclin Q; Belongs to the cyclin family. (263 aa)
rbl1Retinoblastoma-like 1 (p107). (1045 aa)
skilSKI-like proto-oncogene a. (783 aa)
junbJunB protein. (331 aa)
LOC101072027Iroquois homeobox 1a. (495 aa)
irx2Iroquois homeobox 2a. (503 aa)
LOC101070118Iroquois homeobox 7. (318 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (392 aa)
e2f4E2F transcription factor 4. (387 aa)
irx5Iroquois homeobox 5a. (452 aa)
irx6Iroquois homeobox 6a. (502 aa)
smad7Mothers against decapentaplegic homolog. (373 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC101073833Homeobox domain-containing protein. (458 aa)
nedd4lNEDD4 like E3 ubiquitin protein ligase. (1256 aa)
ncor2Nuclear receptor corepressor 2. (2370 aa)
H2U6V0_TAKRUHomeobox domain-containing protein. (368 aa)
tfdp1Transcription factor. (412 aa)
men1Multiple endocrine neoplasia I. (636 aa)
sp1Sp1 transcription factor. (815 aa)
LOC101076671V-ski avian sarcoma viral oncogene homolog b. (694 aa)
ccncCyclin C; Belongs to the cyclin family. (283 aa)
SMAD4Mothers against decapentaplegic homolog. (521 aa)
parp1Poly [ADP-ribose] polymerase. (1047 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (390 aa)
rnf111Ring finger protein 111. (1026 aa)
LOC101068466Mothers against decapentaplegic homolog 4-like. (557 aa)
irx3Iroquois homeobox 3a. (427 aa)
Ccnt2Cyclin T2; Belongs to the cyclin family. (731 aa)
CCNKCyclin K; Belongs to the cyclin family. (547 aa)
LOC101067757Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2602 aa)
tgif1TGFB-induced factor homeobox 1. (430 aa)
LOC101066563Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (391 aa)
LOC101078322Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (828 aa)
snw1SNW domain containing 1. (595 aa)
smad3Mothers against decapentaplegic homolog. (441 aa)
Ccnt1Cyclin-T1 isoform X2. (200 aa)
skiSki oncogene isoform X1. (820 aa)
trim33Tripartite motif containing 33. (1179 aa)
LOC101065179Myeloid ecotropic viral integration site 3. (442 aa)
kxd1KxDL motif containing 1. (194 aa)
LOC101074868MH1 domain-containing protein. (454 aa)
LOC101072080Mothers against decapentaplegic homolog. (651 aa)
atp1b4Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (332 aa)
meis1Meis homeobox 1 b. (407 aa)
LOC101079666Cyclin T2b; Belongs to the cyclin family. (613 aa)
LOC101072871Mothers against decapentaplegic homolog. (467 aa)
LOC101063546Homeobox domain-containing protein. (100 aa)
ENSTRUP00000076792annotation not available (236 aa)
ncor1Nuclear receptor corepressor 1. (2328 aa)
LOC101061571Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (835 aa)
LOC101078309Iroquois homeobox 4a. (471 aa)
mkxMohawk homeobox a. (358 aa)
ENSTRUP00000078709annotation not available (363 aa)
ENSTRUP00000081798Homeobox protein Mohawk-like. (334 aa)
cdk19Cyclin-dependent kinase 19. (490 aa)
cdk8Cyclin dependent kinase 8; Belongs to the protein kinase superfamily. (466 aa)
meis2Meis homeobox 2a. (484 aa)
LOC101077647E2F_TDP domain-containing protein. (84 aa)
LOC101077960Homeobox domain-containing protein. (395 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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