15 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101061204	Uncharacterized protein. (205 aa)
	PAK2	Non-specific serine/threonine protein kinase. (547 aa)
	cd28	IG domain-containing protein. (222 aa)
	grb2	Growth factor receptor-bound protein 2b. (220 aa)
	vtcn1	B7-H4. (272 aa)
	fyn	Tyrosine-protein kinase. (538 aa)
	lck	Tyrosine-protein kinase. (511 aa)
	pak1	Non-specific serine/threonine protein kinase. (562 aa)
	LOC101068145	Uncharacterized protein. (191 aa)
	LOC101067723	Cell division cycle 42. (191 aa)
	LOC101073733	Uncharacterized protein. (202 aa)
	cd276	Uncharacterized protein. (325 aa)
	LOC101063191	Tyrosine-protein kinase fyna. (554 aa)
	pak2	Non-specific serine/threonine protein kinase. (528 aa)
	PAK3	Non-specific serine/threonine protein kinase. (575 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101061204	LOC101063191	ENSTRUP00000049272	ENSTRUP00000063518	Uncharacterized protein.	Tyrosine-protein kinase fyna.	0.544
LOC101061204	LOC101067723	ENSTRUP00000049272	ENSTRUP00000078989	Uncharacterized protein.	Cell division cycle 42.	0.594
LOC101061204	LOC101068145	ENSTRUP00000049272	ENSTRUP00000080891	Uncharacterized protein.	Uncharacterized protein.	0.543
LOC101061204	LOC101073733	ENSTRUP00000049272	ENSTRUP00000078185	Uncharacterized protein.	Uncharacterized protein.	0.594
LOC101061204	PAK2	ENSTRUP00000049272	ENSTRUP00000036768	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.482
LOC101061204	PAK3	ENSTRUP00000049272	ENSTRUP00000042993	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.529
LOC101061204	fyn	ENSTRUP00000049272	ENSTRUP00000008304	Uncharacterized protein.	Tyrosine-protein kinase.	0.544
LOC101061204	grb2	ENSTRUP00000049272	ENSTRUP00000020659	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.903
LOC101061204	lck	ENSTRUP00000049272	ENSTRUP00000011085	Uncharacterized protein.	Tyrosine-protein kinase.	0.545
LOC101061204	pak1	ENSTRUP00000049272	ENSTRUP00000011910	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.529
LOC101061204	pak2	ENSTRUP00000049272	ENSTRUP00000063452	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.482
LOC101063191	LOC101061204	ENSTRUP00000063518	ENSTRUP00000049272	Tyrosine-protein kinase fyna.	Uncharacterized protein.	0.544
LOC101063191	LOC101067723	ENSTRUP00000063518	ENSTRUP00000078989	Tyrosine-protein kinase fyna.	Cell division cycle 42.	0.468
LOC101063191	LOC101068145	ENSTRUP00000063518	ENSTRUP00000080891	Tyrosine-protein kinase fyna.	Uncharacterized protein.	0.430
LOC101063191	LOC101073733	ENSTRUP00000063518	ENSTRUP00000078185	Tyrosine-protein kinase fyna.	Uncharacterized protein.	0.468
LOC101063191	PAK2	ENSTRUP00000063518	ENSTRUP00000036768	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.420
LOC101063191	PAK3	ENSTRUP00000063518	ENSTRUP00000042993	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.444
LOC101063191	grb2	ENSTRUP00000063518	ENSTRUP00000020659	Tyrosine-protein kinase fyna.	Growth factor receptor-bound protein 2b.	0.544
LOC101063191	lck	ENSTRUP00000063518	ENSTRUP00000011085	Tyrosine-protein kinase fyna.	Tyrosine-protein kinase.	0.430
LOC101063191	pak1	ENSTRUP00000063518	ENSTRUP00000011910	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.444