20 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PAK2	Non-specific serine/threonine protein kinase. (547 aa)
	LOC101064301	Rho guanine nucleotide exchange factor (GEF) 7a. (863 aa)
	PAK3	Non-specific serine/threonine protein kinase. (575 aa)
	LOC101065281	Tyrosine-protein kinase. (552 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1224 aa)
	LOC101065603	Eph receptor B2b. (1000 aa)
	LOC101068187	Eph LBD domain-containing protein. (1026 aa)
	LOC101072452	Syndecan binding protein (syntenin) 2. (302 aa)
	LOC101066462	Rho guanine nucleotide exchange factor (GEF) 7b. (851 aa)
	LOC101063508	Ephrin-B3a; Belongs to the ephrin family. (342 aa)
	efnb1	Ephrin-B1; Belongs to the ephrin family. (332 aa)
	LOC101063191	Tyrosine-protein kinase fyna. (554 aa)
	pak2	Non-specific serine/threonine protein kinase. (528 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1253 aa)
	src	Tyrosine-protein kinase. (552 aa)
	LOC101078775	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (323 aa)
	fyn	Tyrosine-protein kinase. (538 aa)
	pak1	Non-specific serine/threonine protein kinase. (562 aa)
	LOC101069940	Eph receptor B2a. (1009 aa)
	LOC101067733	EPH receptor B1. (1013 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101063191	LOC101063508	ENSTRUP00000063518	ENSTRUP00000067412	Tyrosine-protein kinase fyna.	Ephrin-B3a; Belongs to the ephrin family.	0.403
LOC101063191	LOC101065281	ENSTRUP00000063518	ENSTRUP00000084615	Tyrosine-protein kinase fyna.	Tyrosine-protein kinase.	0.425
LOC101063191	PAK2	ENSTRUP00000063518	ENSTRUP00000036768	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.420
LOC101063191	PAK3	ENSTRUP00000063518	ENSTRUP00000042993	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.444
LOC101063191	efnb1	ENSTRUP00000063518	ENSTRUP00000063739	Tyrosine-protein kinase fyna.	Ephrin-B1; Belongs to the ephrin family.	0.403
LOC101063191	pak1	ENSTRUP00000063518	ENSTRUP00000011910	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.444
LOC101063191	pak2	ENSTRUP00000063518	ENSTRUP00000063452	Tyrosine-protein kinase fyna.	Non-specific serine/threonine protein kinase.	0.420
LOC101063191	src	ENSTRUP00000063518	ENSTRUP00000047001	Tyrosine-protein kinase fyna.	Tyrosine-protein kinase.	0.425
LOC101063508	LOC101063191	ENSTRUP00000067412	ENSTRUP00000063518	Ephrin-B3a; Belongs to the ephrin family.	Tyrosine-protein kinase fyna.	0.403
LOC101063508	LOC101064301	ENSTRUP00000067412	ENSTRUP00000036973	Ephrin-B3a; Belongs to the ephrin family.	Rho guanine nucleotide exchange factor (GEF) 7a.	0.447
LOC101063508	LOC101065281	ENSTRUP00000067412	ENSTRUP00000084615	Ephrin-B3a; Belongs to the ephrin family.	Tyrosine-protein kinase.	0.425
LOC101063508	LOC101065603	ENSTRUP00000067412	ENSTRUP00000080957	Ephrin-B3a; Belongs to the ephrin family.	Eph receptor B2b.	0.628
LOC101063508	LOC101066462	ENSTRUP00000067412	ENSTRUP00000069148	Ephrin-B3a; Belongs to the ephrin family.	Rho guanine nucleotide exchange factor (GEF) 7b.	0.447
LOC101063508	LOC101067733	ENSTRUP00000067412	ENSTRUP00000033217	Ephrin-B3a; Belongs to the ephrin family.	EPH receptor B1.	0.648
LOC101063508	LOC101068187	ENSTRUP00000067412	ENSTRUP00000071077	Ephrin-B3a; Belongs to the ephrin family.	Eph LBD domain-containing protein.	0.648
LOC101063508	LOC101069940	ENSTRUP00000067412	ENSTRUP00000014239	Ephrin-B3a; Belongs to the ephrin family.	Eph receptor B2a.	0.737
LOC101063508	LOC101072452	ENSTRUP00000067412	ENSTRUP00000081331	Ephrin-B3a; Belongs to the ephrin family.	Syndecan binding protein (syntenin) 2.	0.563
LOC101063508	PAK2	ENSTRUP00000067412	ENSTRUP00000036768	Ephrin-B3a; Belongs to the ephrin family.	Non-specific serine/threonine protein kinase.	0.456
LOC101063508	PAK3	ENSTRUP00000067412	ENSTRUP00000042993	Ephrin-B3a; Belongs to the ephrin family.	Non-specific serine/threonine protein kinase.	0.453
LOC101063508	fyn	ENSTRUP00000067412	ENSTRUP00000008304	Ephrin-B3a; Belongs to the ephrin family.	Tyrosine-protein kinase.	0.561