18 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pdpk1	3-phosphoinositide dependent protein kinase 1b. (559 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1224 aa)
	prkcd	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (688 aa)
	LOC101065281	Tyrosine-protein kinase. (552 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (905 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (218 aa)
	LOC101063530	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (682 aa)
	LOC115253205	PiggyBac transposable element-derived protein 4-like. (411 aa)
	Prkcz	PB1 domain-containing protein. (581 aa)
	plcg1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1314 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1253 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (210 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	src	Tyrosine-protein kinase. (552 aa)
	SPHK1	Sphingosine kinase 1. (565 aa)
	LOC101062196	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (169 aa)
	LOC101069736	Zgc:55558. (187 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1056 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	LOC101063530	ENSTRUP00000080673	ENSTRUP00000073799	Cold shock domain containing E1, RNA-binding.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.515
CSDE1	Prkcz	ENSTRUP00000080673	ENSTRUP00000061396	Cold shock domain containing E1, RNA-binding.	PB1 domain-containing protein.	0.475
CSDE1	pdpk1	ENSTRUP00000080673	ENSTRUP00000039872	Cold shock domain containing E1, RNA-binding.	3-phosphoinositide dependent protein kinase 1b.	0.495
CSDE1	prkcd	ENSTRUP00000080673	ENSTRUP00000085227	Cold shock domain containing E1, RNA-binding.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.515
CSDE1	rasa1	ENSTRUP00000080673	ENSTRUP00000003275	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator (GTPase activating protein) 1a.	0.794
LOC101063530	CSDE1	ENSTRUP00000073799	ENSTRUP00000080673	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Cold shock domain containing E1, RNA-binding.	0.515
LOC101063530	LOC101069736	ENSTRUP00000073799	ENSTRUP00000016293	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Zgc:55558.	0.515
LOC101063530	LOC115253205	ENSTRUP00000073799	ENSTRUP00000062504	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	PiggyBac transposable element-derived protein 4-like.	0.430
LOC101063530	Prkcz	ENSTRUP00000073799	ENSTRUP00000061396	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	PB1 domain-containing protein.	0.480
LOC101063530	hras	ENSTRUP00000073799	ENSTRUP00000052118	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	HRas proto-oncogene, GTPase a.	0.515
LOC101063530	kras	ENSTRUP00000073799	ENSTRUP00000052814	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.515
LOC101063530	pdpk1	ENSTRUP00000073799	ENSTRUP00000039872	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	3-phosphoinositide dependent protein kinase 1b.	0.747
LOC101063530	plcg1	ENSTRUP00000073799	ENSTRUP00000058192	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.438
LOC101063530	rasa1	ENSTRUP00000073799	ENSTRUP00000003275	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	RAS p21 protein activator (GTPase activating protein) 1a.	0.489
LOC101065281	LOC101069736	ENSTRUP00000084615	ENSTRUP00000016293	Tyrosine-protein kinase.	Zgc:55558.	0.510
LOC101065281	hras	ENSTRUP00000084615	ENSTRUP00000052118	Tyrosine-protein kinase.	HRas proto-oncogene, GTPase a.	0.564
LOC101065281	kras	ENSTRUP00000084615	ENSTRUP00000052814	Tyrosine-protein kinase.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.510
LOC101065281	pdpk1	ENSTRUP00000084615	ENSTRUP00000039872	Tyrosine-protein kinase.	3-phosphoinositide dependent protein kinase 1b.	0.409
LOC101065281	src	ENSTRUP00000084615	ENSTRUP00000047001	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101069736	LOC101063530	ENSTRUP00000016293	ENSTRUP00000073799	Zgc:55558.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.515