61 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tln2	Talin 2b. (2550 aa)
	rap1a	Uncharacterized protein. (145 aa)
	cnksr2	Connector enhancer of kinase suppressor of Ras 2a. (1013 aa)
	IL17RD	IL17R_D_N domain-containing protein. (792 aa)
	mark3	Non-specific serine/threonine protein kinase. (756 aa)
	LOC101071113	Vinculin a. (1138 aa)
	ksr2	Kinase suppressor of ras 2. (970 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (905 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
	ENSTRUP00000084039	annotation not available (227 aa)
	MARK3	Non-specific serine/threonine protein kinase. (771 aa)
	LOC101076921	Arrestin, beta 2a. (407 aa)
	araf	Uncharacterized protein. (597 aa)
	fgb	Fibrinogen beta chain. (491 aa)
	lamtor3	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3. (124 aa)
	LOC101079403	Kinase suppressor of ras 1b. (579 aa)
	fgg	Fibrinogen gamma chain. (446 aa)
	raf1	Uncharacterized protein. (652 aa)
	LOC101069736	Zgc:55558. (187 aa)
	LOC101069450	Connector enhancer of kinase suppressor of ras 2-like isoform X1. (1108 aa)
	H2RJL7_TAKRU	Uncharacterized protein. (581 aa)
	LOC101069102	Actin, cytoplasmic 3, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (399 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1224 aa)
	LOC105419331	Si:ch211-207e14.4. (628 aa)
	LOC101065281	Tyrosine-protein kinase. (552 aa)
	LOC101079180	Interleukin-17 receptor D-like isoform X1. (854 aa)
	LOC101075584	Integrin beta; Belongs to the integrin beta chain family. (808 aa)
	pebp1	Phosphatidylethanolamine binding protein 1. (187 aa)
	csk	Tyrosine-protein kinase. (511 aa)
	src	Tyrosine-protein kinase. (552 aa)
	LOC101064095	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1330 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (390 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC101064935	Uncharacterized protein. (185 aa)
	ENSTRUP00000052717	Actin, cytoplasmic 1 Actin, cytoplasmic 1, N-terminally processed. (413 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (210 aa)
	wdr83	WD repeat domain containing 83. (322 aa)
	LOC101070080	Uncharacterized protein. (184 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1253 aa)
	LOC101066563	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (391 aa)
	LOC101070303	Connector enhancer of kinase suppressor of Ras 2b. (1010 aa)
	tlnrd1	Talin rod domain containing 1. (354 aa)
	CSK	C-terminal Src kinase. (455 aa)
	LOC101073885	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a. (1446 aa)
	LOC115253205	PiggyBac transposable element-derived protein 4-like. (411 aa)
	braf	Uncharacterized protein. (1123 aa)
	lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. (125 aa)
	map2k2	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (399 aa)
	LOC101061998	Fibronectin 1a. (2503 aa)
	tlnrd1-2	Talin rod domain-containing protein 1-like. (354 aa)
	CSK-2	Tyrosine-protein kinase CSK isoform X1. (461 aa)
	LOC101074250	RAP1A, member of RAS oncogene family a. (185 aa)
	LOC101071585	Arrestin_C domain-containing protein. (408 aa)
	LOC101070876	Uncharacterized protein. (997 aa)
	apbb1ip	Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein. (632 aa)
	cnksr1	Connector enhancer of kinase suppressor of Ras 1. (831 aa)
	Tln1	Talin 1. (2471 aa)
	ksr1	Kinase suppressor of ras 1a. (987 aa)
	vcl	Vinculin b. (1017 aa)
	ENSTRUP00000034556	Actin, cytoplasmic 2 Actin, cytoplasmic 2, N-terminally processed. (429 aa)
	LOC101062418	Cnksr family member 3. (524 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSTRUP00000084039	ENSTRUP00000080673	ENSTRUP00000084039	Cold shock domain containing E1, RNA-binding.	annotation not available	0.424
CSDE1	LOC101062418	ENSTRUP00000080673	ENSTRUP00000040192	Cold shock domain containing E1, RNA-binding.	Cnksr family member 3.	0.424
CSDE1	LOC101064095	ENSTRUP00000080673	ENSTRUP00000050250	Cold shock domain containing E1, RNA-binding.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b.	0.497
CSDE1	LOC101066563	ENSTRUP00000080673	ENSTRUP00000057781	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.454
CSDE1	LOC101069450	ENSTRUP00000080673	ENSTRUP00000087322	Cold shock domain containing E1, RNA-binding.	Connector enhancer of kinase suppressor of ras 2-like isoform X1.	0.424
CSDE1	LOC101070303	ENSTRUP00000080673	ENSTRUP00000058061	Cold shock domain containing E1, RNA-binding.	Connector enhancer of kinase suppressor of Ras 2b.	0.424
CSDE1	LOC101070876	ENSTRUP00000080673	ENSTRUP00000022242	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.424
CSDE1	LOC101071113	ENSTRUP00000080673	ENSTRUP00000078012	Cold shock domain containing E1, RNA-binding.	Vinculin a.	0.432
CSDE1	LOC101073885	ENSTRUP00000080673	ENSTRUP00000060752	Cold shock domain containing E1, RNA-binding.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a.	0.497
CSDE1	LOC101079403	ENSTRUP00000080673	ENSTRUP00000011453	Cold shock domain containing E1, RNA-binding.	Kinase suppressor of ras 1b.	0.583
CSDE1	Tln1	ENSTRUP00000080673	ENSTRUP00000027974	Cold shock domain containing E1, RNA-binding.	Talin 1.	0.423
CSDE1	apbb1ip	ENSTRUP00000080673	ENSTRUP00000025466	Cold shock domain containing E1, RNA-binding.	Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.	0.514
CSDE1	araf	ENSTRUP00000080673	ENSTRUP00000004446	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.747
CSDE1	braf	ENSTRUP00000080673	ENSTRUP00000063664	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.747
CSDE1	cnksr1	ENSTRUP00000080673	ENSTRUP00000026130	Cold shock domain containing E1, RNA-binding.	Connector enhancer of kinase suppressor of Ras 1.	0.466
CSDE1	cnksr2	ENSTRUP00000080673	ENSTRUP00000074053	Cold shock domain containing E1, RNA-binding.	Connector enhancer of kinase suppressor of Ras 2a.	0.424
CSDE1	ksr1	ENSTRUP00000080673	ENSTRUP00000029125	Cold shock domain containing E1, RNA-binding.	Kinase suppressor of ras 1a.	0.583
CSDE1	ksr2	ENSTRUP00000080673	ENSTRUP00000079747	Cold shock domain containing E1, RNA-binding.	Kinase suppressor of ras 2.	0.583
CSDE1	lamtor2	ENSTRUP00000080673	ENSTRUP00000067569	Cold shock domain containing E1, RNA-binding.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.414
CSDE1	map2k1	ENSTRUP00000080673	ENSTRUP00000081797	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.598