22 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TGFB1I1	Transforming growth factor beta-1-induced transcript 1 protein; Functions as a molecular adapter coordinating multiple protein-protein interactions at the focal adhesion complex and in the nucleus. Links various intracellular signaling modules to plasma membrane receptors and regulates the Wnt and TGFB signaling pathways. (491 aa)
	arhgap35	Uncharacterized protein. (1560 aa)
	LOC101065989	CRK proto-oncogene, adaptor protein. (319 aa)
	LOC101070523	Engulfment and cell motility 1. (744 aa)
	RNF222	Ring finger protein 222. (239 aa)
	elmo3	Engulfment and cell motility 3. (715 aa)
	LOC101069736	Zgc:55558. (187 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1056 aa)
	LOC115253205	PiggyBac transposable element-derived protein 4-like. (411 aa)
	elmod3	ELMO/CED-12 domain containing 3. (135 aa)
	elmod1	ELMO/CED-12 domain containing 1. (309 aa)
	LOC101061819	Tyrosine-protein kinase. (319 aa)
	LOC101061071	Leupaxin. (398 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (905 aa)
	ENSTRUP00000082110	annotation not available (115 aa)
	LOC101076373	Engulfment and cell motility 2. (721 aa)
	pxn	Uncharacterized protein. (1106 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (210 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	PXN	Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family. (522 aa)
	LOC101068709	Rho GTPase activating protein 35b. (1529 aa)
	elmod2	ELMO/CED-12 domain containing 2. (299 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSTRUP00000082110	ENSTRUP00000080673	ENSTRUP00000082110	Cold shock domain containing E1, RNA-binding.	annotation not available	0.417
CSDE1	LOC101061819	ENSTRUP00000080673	ENSTRUP00000072117	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.417
CSDE1	LOC101068709	ENSTRUP00000080673	ENSTRUP00000037716	Cold shock domain containing E1, RNA-binding.	Rho GTPase activating protein 35b.	0.450
CSDE1	arhgap35	ENSTRUP00000080673	ENSTRUP00000030907	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.450
CSDE1	rasa1	ENSTRUP00000080673	ENSTRUP00000003275	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator (GTPase activating protein) 1a.	0.794
ENSTRUP00000082110	CSDE1	ENSTRUP00000082110	ENSTRUP00000080673	annotation not available	Cold shock domain containing E1, RNA-binding.	0.417
ENSTRUP00000082110	LOC101061071	ENSTRUP00000082110	ENSTRUP00000074730	annotation not available	Leupaxin.	0.462
ENSTRUP00000082110	LOC101065989	ENSTRUP00000082110	ENSTRUP00000030297	annotation not available	CRK proto-oncogene, adaptor protein.	0.488
ENSTRUP00000082110	LOC101068709	ENSTRUP00000082110	ENSTRUP00000037716	annotation not available	Rho GTPase activating protein 35b.	0.486
ENSTRUP00000082110	LOC101069736	ENSTRUP00000082110	ENSTRUP00000016293	annotation not available	Zgc:55558.	0.417
ENSTRUP00000082110	PXN	ENSTRUP00000082110	ENSTRUP00000040413	annotation not available	Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.	0.462
ENSTRUP00000082110	TGFB1I1	ENSTRUP00000082110	ENSTRUP00000013270	annotation not available	Transforming growth factor beta-1-induced transcript 1 protein; Functions as a molecular adapter coordinating multiple protein-protein interactions at the focal adhesion complex and in the nucleus. Links various intracellular signaling modules to plasma membrane receptors and regulates the Wnt and TGFB signaling pathways.	0.462
ENSTRUP00000082110	arhgap35	ENSTRUP00000082110	ENSTRUP00000030907	annotation not available	Uncharacterized protein.	0.486
ENSTRUP00000082110	hras	ENSTRUP00000082110	ENSTRUP00000052118	annotation not available	HRas proto-oncogene, GTPase a.	0.417
ENSTRUP00000082110	kras	ENSTRUP00000082110	ENSTRUP00000052814	annotation not available	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.417
ENSTRUP00000082110	pxn	ENSTRUP00000082110	ENSTRUP00000055490	annotation not available	Uncharacterized protein.	0.462
LOC101061071	ENSTRUP00000082110	ENSTRUP00000074730	ENSTRUP00000082110	Leupaxin.	annotation not available	0.462
LOC101061071	LOC101061819	ENSTRUP00000074730	ENSTRUP00000072117	Leupaxin.	Tyrosine-protein kinase.	0.462
LOC101061071	LOC101065989	ENSTRUP00000074730	ENSTRUP00000030297	Leupaxin.	CRK proto-oncogene, adaptor protein.	0.694
LOC101061071	LOC101070523	ENSTRUP00000074730	ENSTRUP00000029809	Leupaxin.	Engulfment and cell motility 1.	0.421