12 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101074632	HMG box domain-containing protein. (585 aa)
	nkx1-1	NK1 transcription factor related 2-like,b. (393 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (781 aa)
	tcf7	Transcription factor 7. (491 aa)
	LOC115246539	Sex-determining region Y protein-like. (423 aa)
	LOC115251054	Lymphoid enhancer-binding factor 1-like isoform X1. (315 aa)
	LOC115251451	Transcription factor 7-like 1. (269 aa)
	lef1	Lymphoid enhancer-binding factor 1. (377 aa)
	bsx	Brain-specific homeobox. (228 aa)
	tcf7l1	Transcription factor 7 like 1b. (592 aa)
	LOC105419230	Uncharacterized protein. (809 aa)
	LOC101064904	Homeobox protein vent1. (236 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101074632	bsx	ENSTRUP00000047734	ENSTRUP00000068480	HMG box domain-containing protein.	Brain-specific homeobox.	0.493
LOC101074632	ctnnb1	ENSTRUP00000047734	ENSTRUP00000008263	HMG box domain-containing protein.	Catenin (cadherin-associated protein), beta 1.	0.980
LOC101074632	lef1	ENSTRUP00000047734	ENSTRUP00000073083	HMG box domain-containing protein.	Lymphoid enhancer-binding factor 1.	0.514
LOC105419230	bsx	ENSTRUP00000055711	ENSTRUP00000068480	Uncharacterized protein.	Brain-specific homeobox.	0.493
LOC105419230	ctnnb1	ENSTRUP00000055711	ENSTRUP00000008263	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.814
LOC105419230	lef1	ENSTRUP00000055711	ENSTRUP00000073083	Uncharacterized protein.	Lymphoid enhancer-binding factor 1.	0.514
LOC115246539	bsx	ENSTRUP00000080660	ENSTRUP00000068480	Sex-determining region Y protein-like.	Brain-specific homeobox.	0.493
LOC115246539	ctnnb1	ENSTRUP00000080660	ENSTRUP00000008263	Sex-determining region Y protein-like.	Catenin (cadherin-associated protein), beta 1.	0.814
LOC115246539	lef1	ENSTRUP00000080660	ENSTRUP00000073083	Sex-determining region Y protein-like.	Lymphoid enhancer-binding factor 1.	0.514
LOC115251054	bsx	ENSTRUP00000076895	ENSTRUP00000068480	Lymphoid enhancer-binding factor 1-like isoform X1.	Brain-specific homeobox.	0.493
LOC115251054	ctnnb1	ENSTRUP00000076895	ENSTRUP00000008263	Lymphoid enhancer-binding factor 1-like isoform X1.	Catenin (cadherin-associated protein), beta 1.	0.980
LOC115251054	lef1	ENSTRUP00000076895	ENSTRUP00000073083	Lymphoid enhancer-binding factor 1-like isoform X1.	Lymphoid enhancer-binding factor 1.	0.514
LOC115251054	tcf7	ENSTRUP00000076895	ENSTRUP00000087486	Lymphoid enhancer-binding factor 1-like isoform X1.	Transcription factor 7.	0.429
LOC115251451	bsx	ENSTRUP00000073971	ENSTRUP00000068480	Transcription factor 7-like 1.	Brain-specific homeobox.	0.493
LOC115251451	ctnnb1	ENSTRUP00000073971	ENSTRUP00000008263	Transcription factor 7-like 1.	Catenin (cadherin-associated protein), beta 1.	0.814
LOC115251451	lef1	ENSTRUP00000073971	ENSTRUP00000073083	Transcription factor 7-like 1.	Lymphoid enhancer-binding factor 1.	0.514
bsx	LOC101074632	ENSTRUP00000068480	ENSTRUP00000047734	Brain-specific homeobox.	HMG box domain-containing protein.	0.493
bsx	LOC105419230	ENSTRUP00000068480	ENSTRUP00000055711	Brain-specific homeobox.	Uncharacterized protein.	0.493
bsx	LOC115246539	ENSTRUP00000068480	ENSTRUP00000080660	Brain-specific homeobox.	Sex-determining region Y protein-like.	0.493
bsx	LOC115251054	ENSTRUP00000068480	ENSTRUP00000076895	Brain-specific homeobox.	Lymphoid enhancer-binding factor 1-like isoform X1.	0.493