(23 nodes) ER Quality Control Compartment (ERQC) network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	uggt2	UDP-glucose glycoprotein glucosyltransferase 2. (1550 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (764 aa)
	march11	Membrane-associated ring finger (C3HC4) 11. (291 aa)
	rnf139	Ring finger protein 139. (702 aa)
	LOC101074148	Membrane-associated ring finger (C3HC4) 2. (248 aa)
	LOC105418968	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like. (723 aa)
	marchf8	Membrane-associated ring finger (C3HC4) 8. (281 aa)
	marchf1	Membrane-associated ring finger (C3HC4) 1. (563 aa)
	LOC101075280	E3 ubiquitin-protein ligase MARCH6-like. (911 aa)
	LOC101065249	RING-CH-type domain-containing protein. (292 aa)
	MARCHF9	Membrane associated ring-CH-type finger 9. (330 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (638 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	marchf6	Membrane-associated ring finger (C3HC4) 6. (915 aa)
	marchf4	Membrane-associated ring finger (C3HC4) 4. (399 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC101067969	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (874 aa)
	edem2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (589 aa)
	LOC101077904	E3 ubiquitin-protein ligase MARCH4/9/11. (336 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1535 aa)
	LOC101072461	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (676 aa)
	edem3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (907 aa)
	kxd1	KxDL motif containing 1. (194 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101075280	marchf6	ENSTRUP00000087531	ENSTRUP00000022643	E3 ubiquitin-protein ligase MARCH6-like.	Membrane-associated ring finger (C3HC4) 6.	0.901
LOC101075280	rnf139	ENSTRUP00000087531	ENSTRUP00000009618	E3 ubiquitin-protein ligase MARCH6-like.	Ring finger protein 139.	0.494
edem1	uggt1	ENSTRUP00000028552	ENSTRUP00000076499	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 1.	0.436
edem1	uggt2	ENSTRUP00000028552	ENSTRUP00000071757	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 2.	0.436
edem2	uggt1	ENSTRUP00000083360	ENSTRUP00000076499	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 1.	0.481
edem2	uggt2	ENSTRUP00000083360	ENSTRUP00000071757	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 2.	0.481
kxd1	rps27a	ENSTRUP00000069113	ENSTRUP00000027679	KxDL motif containing 1.	Ribosomal protein S27a.	0.958
kxd1	uba52	ENSTRUP00000069113	ENSTRUP00000009801	KxDL motif containing 1.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.899
march11	marchf7	ENSTRUP00000003675	ENSTRUP00000067315	Membrane-associated ring finger (C3HC4) 11.	Membrane-associated ring finger (C3HC4) 7.	0.552
marchf6	LOC101075280	ENSTRUP00000022643	ENSTRUP00000087531	Membrane-associated ring finger (C3HC4) 6.	E3 ubiquitin-protein ligase MARCH6-like.	0.901
marchf6	rnf139	ENSTRUP00000022643	ENSTRUP00000009618	Membrane-associated ring finger (C3HC4) 6.	Ring finger protein 139.	0.494
marchf7	march11	ENSTRUP00000067315	ENSTRUP00000003675	Membrane-associated ring finger (C3HC4) 7.	Membrane-associated ring finger (C3HC4) 11.	0.552
rnf139	LOC101075280	ENSTRUP00000009618	ENSTRUP00000087531	Ring finger protein 139.	E3 ubiquitin-protein ligase MARCH6-like.	0.494
rnf139	marchf6	ENSTRUP00000009618	ENSTRUP00000022643	Ring finger protein 139.	Membrane-associated ring finger (C3HC4) 6.	0.494
rnf139	rps27a	ENSTRUP00000009618	ENSTRUP00000027679	Ring finger protein 139.	Ribosomal protein S27a.	0.640
rnf139	uba52	ENSTRUP00000009618	ENSTRUP00000009801	Ring finger protein 139.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.617
rps27a	kxd1	ENSTRUP00000027679	ENSTRUP00000069113	Ribosomal protein S27a.	KxDL motif containing 1.	0.958
rps27a	rnf139	ENSTRUP00000027679	ENSTRUP00000009618	Ribosomal protein S27a.	Ring finger protein 139.	0.640
rps27a	uba52	ENSTRUP00000027679	ENSTRUP00000009801	Ribosomal protein S27a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
uba52	kxd1	ENSTRUP00000009801	ENSTRUP00000069113	Ubiquitin A-52 residue ribosomal protein fusion product 1.	KxDL motif containing 1.	0.899