(5 nodes) Endoplasmic reticulum vesicle transporter network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101077205	Uncharacterized protein. (378 aa)
	ERGIC3	Endoplasmic reticulum-Golgi intermediate compartment protein 3. (389 aa)
	LOC101078429	ERGIC and golgi 3. (389 aa)
	ERGIC2	ERGIC and golgi 2. (388 aa)
	ergic1	Endoplasmic reticulum-golgi intermediate compartment 1. (292 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERGIC2	ERGIC3	ENSTRUP00000048435	ENSTRUP00000072911	ERGIC and golgi 2.	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	0.825
ERGIC2	LOC101078429	ENSTRUP00000048435	ENSTRUP00000000204	ERGIC and golgi 2.	ERGIC and golgi 3.	0.825
ERGIC3	ERGIC2	ENSTRUP00000072911	ENSTRUP00000048435	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	ERGIC and golgi 2.	0.825
ERGIC3	LOC101077205	ENSTRUP00000072911	ENSTRUP00000075837	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	Uncharacterized protein.	0.824
LOC101077205	ERGIC3	ENSTRUP00000075837	ENSTRUP00000072911	Uncharacterized protein.	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	0.824
LOC101077205	LOC101078429	ENSTRUP00000075837	ENSTRUP00000000204	Uncharacterized protein.	ERGIC and golgi 3.	0.824
LOC101078429	ERGIC2	ENSTRUP00000000204	ENSTRUP00000048435	ERGIC and golgi 3.	ERGIC and golgi 2.	0.825
LOC101078429	LOC101077205	ENSTRUP00000000204	ENSTRUP00000075837	ERGIC and golgi 3.	Uncharacterized protein.	0.824