STRINGSTRING
DDAH1 DDAH1 LOC101069707 LOC101069707 LOC101077756 LOC101077756 LOC101078599 LOC101078599 LOC101075864 LOC101075864 sf3a1 sf3a1 slc7a4 slc7a4 ppil4 ppil4 LOC101074926 LOC101074926 clic2 clic2 slc15a4 slc15a4 LOC101073519 LOC101073519 LOC101080224 LOC101080224 ENSTRUP00000049668 ENSTRUP00000049668 tapbp tapbp LOC101072178 LOC101072178 skiv2l skiv2l ddah2 ddah2 LOC101063406 LOC101063406 pbx3 pbx3 slc12a5 slc12a5 rxra rxra col11a1 col11a1 clic4 clic4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DDAH1Dimethylarginine dimethylaminohydrolase 1. (282 aa)
LOC101069707Pre-B-cell leukemia homeobox 1b. (433 aa)
LOC101077756Proteasome subunit beta. (275 aa)
LOC101078599Notch receptor 3. (2439 aa)
LOC101075864Valyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family. (1066 aa)
sf3a1Splicing factor 3a, subunit 1. (780 aa)
slc7a4Solute carrier family 7 member 4. (668 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (440 aa)
LOC101074926Proteasome subunit beta. (280 aa)
clic2Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (245 aa)
slc15a4Solute carrier family 15 member 4. (582 aa)
LOC101073519Ral guanine nucleotide dissociation stimulator-like 2. (738 aa)
LOC101080224Notch receptor 2. (2500 aa)
ENSTRUP00000049668Dimethylarginine dimethylaminohydrolase 2. (293 aa)
tapbpTAP binding protein (tapasin), tandem duplicate 2. (466 aa)
LOC101072178Palmitoyl-protein thioesterase 2. (307 aa)
skiv2lSKI2 homolog, superkiller viralicidic activity 2-like. (1291 aa)
ddah2Dimethylarginine dimethylaminohydrolase 2. (287 aa)
LOC101063406Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (243 aa)
pbx3Homeobox domain-containing protein. (486 aa)
slc12a5Solute carrier family 12 member 5a. (1179 aa)
rxraRetinoid X receptor, alpha a. (496 aa)
col11a1Collagen, type XI, alpha 1a. (1582 aa)
clic4Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (252 aa)
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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