22 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2S9M4_TAKRU	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (491 aa)
	tln2	Talin 2b. (2550 aa)
	got1	Aspartate aminotransferase. (444 aa)
	TOMM7	Translocase of outer mitochondrial membrane 7. (51 aa)
	Tln1	Talin 1. (2471 aa)
	WNT2B	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (378 aa)
	vcl	Vinculin b. (1017 aa)
	LOC101069649	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
	ppat	Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (505 aa)
	LOC101067574	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (391 aa)
	LOC101073008	RAS guanyl releasing protein 4. (701 aa)
	abat	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (499 aa)
	LOC101078823	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
	rictor	RICTOR_N domain-containing protein. (1725 aa)
	RASGRP1	RAS guanyl releasing protein 1. (786 aa)
	LOC101078482	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
	LOC101063508	Ephrin-B3a; Belongs to the ephrin family. (342 aa)
	sema4b	Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
	LOC101067723	Cell division cycle 42. (191 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
	LOC101071463	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (378 aa)
	wnt3a	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2S9M4_TAKRU	abat	ENSTRUP00000009100	ENSTRUP00000052139	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.753
H2S9M4_TAKRU	got1	ENSTRUP00000009100	ENSTRUP00000017944	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Aspartate aminotransferase.	0.654
H2S9M4_TAKRU	ppat	ENSTRUP00000009100	ENSTRUP00000040223	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.	0.509
LOC101063508	LOC101078482	ENSTRUP00000067412	ENSTRUP00000063285	Ephrin-B3a; Belongs to the ephrin family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.456
LOC101063508	Tln1	ENSTRUP00000067412	ENSTRUP00000027974	Ephrin-B3a; Belongs to the ephrin family.	Talin 1.	0.410
LOC101063508	abat	ENSTRUP00000067412	ENSTRUP00000052139	Ephrin-B3a; Belongs to the ephrin family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.451
LOC101063508	ppat	ENSTRUP00000067412	ENSTRUP00000040223	Ephrin-B3a; Belongs to the ephrin family.	Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.	0.464
LOC101063508	sema4b	ENSTRUP00000067412	ENSTRUP00000072325	Ephrin-B3a; Belongs to the ephrin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.433
LOC101063508	tln2	ENSTRUP00000067412	ENSTRUP00000086851	Ephrin-B3a; Belongs to the ephrin family.	Talin 2b.	0.428
LOC101067574	LOC101069649	ENSTRUP00000042225	ENSTRUP00000036498	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.444
LOC101067574	LOC101071463	ENSTRUP00000042225	ENSTRUP00000083216	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.444
LOC101067574	LOC101078823	ENSTRUP00000042225	ENSTRUP00000055806	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.484
LOC101067574	WNT2B	ENSTRUP00000042225	ENSTRUP00000031819	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.444
LOC101067574	map2k1	ENSTRUP00000042225	ENSTRUP00000081797	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.488
LOC101067574	rictor	ENSTRUP00000042225	ENSTRUP00000063007	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	RICTOR_N domain-containing protein.	0.420
LOC101067574	wnt3a	ENSTRUP00000042225	ENSTRUP00000084785	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.445
LOC101067723	RASGRP1	ENSTRUP00000078989	ENSTRUP00000063036	Cell division cycle 42.	RAS guanyl releasing protein 1.	0.490
LOC101067723	map2k1	ENSTRUP00000078989	ENSTRUP00000081797	Cell division cycle 42.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.530
LOC101067723	vcl	ENSTRUP00000078989	ENSTRUP00000033394	Cell division cycle 42.	Vinculin b.	0.422
LOC101069649	LOC101067574	ENSTRUP00000036498	ENSTRUP00000042225	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.444