20 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101078447	Amyloid-beta A4 protein; Functional neuronal receptor which couples to intracellular signaling pathway through the GTP-binding protein G(O); Belongs to the APP family. (749 aa)
	gcg	Glucagon b. (121 aa)
	LOC101076657	Neuropeptide Y. (99 aa)
	GCG	Glucagon. (178 aa)
	pgr	Progesterone receptor. (718 aa)
	nck2	Cytoplasmic protein. (396 aa)
	NPY	Neuropeptide Y. (99 aa)
	LOC101076883	Synaptic vesicle glycoprotein 2. (541 aa)
	nck1	Cytoplasmic protein. (399 aa)
	OTP	Orthopedia homeobox. (334 aa)
	src	Tyrosine-protein kinase. (552 aa)
	LOC101077059	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (327 aa)
	LOC101077619	Uncharacterized protein. (326 aa)
	LOC101073060	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (417 aa)
	LOC101066292	Uncharacterized protein; Belongs to the protein kinase superfamily. (372 aa)
	braf	Uncharacterized protein. (1123 aa)
	LOC101067793	NOVA alternative splicing regulator 2. (511 aa)
	LOC101069822	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (384 aa)
	LOC101067856	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (353 aa)
	LOC101065281	Tyrosine-protein kinase. (552 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GCG	LOC101076657	ENSTRUP00000021901	ENSTRUP00000016766	Glucagon.	Neuropeptide Y.	0.412
LOC101065281	LOC101077059	ENSTRUP00000084615	ENSTRUP00000048623	Tyrosine-protein kinase.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.442
LOC101065281	braf	ENSTRUP00000084615	ENSTRUP00000063664	Tyrosine-protein kinase.	Uncharacterized protein.	0.571
LOC101065281	nck1	ENSTRUP00000084615	ENSTRUP00000045455	Tyrosine-protein kinase.	Cytoplasmic protein.	0.527
LOC101065281	nck2	ENSTRUP00000084615	ENSTRUP00000034543	Tyrosine-protein kinase.	Cytoplasmic protein.	0.524
LOC101065281	src	ENSTRUP00000084615	ENSTRUP00000047001	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101066292	LOC101067856	ENSTRUP00000063491	ENSTRUP00000076783	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC101066292	LOC101069822	ENSTRUP00000063491	ENSTRUP00000070462	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC101066292	pgr	ENSTRUP00000063491	ENSTRUP00000033392	Uncharacterized protein; Belongs to the protein kinase superfamily.	Progesterone receptor.	0.916
LOC101067793	LOC101073060	ENSTRUP00000064396	ENSTRUP00000060734	NOVA alternative splicing regulator 2.	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	0.578
LOC101067793	LOC101077619	ENSTRUP00000064396	ENSTRUP00000052329	NOVA alternative splicing regulator 2.	Uncharacterized protein.	0.660
LOC101067856	LOC101066292	ENSTRUP00000076783	ENSTRUP00000063491	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC101067856	LOC101069822	ENSTRUP00000076783	ENSTRUP00000070462	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC101067856	pgr	ENSTRUP00000076783	ENSTRUP00000033392	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Progesterone receptor.	0.916
LOC101069822	LOC101066292	ENSTRUP00000070462	ENSTRUP00000063491	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC101069822	LOC101067856	ENSTRUP00000070462	ENSTRUP00000076783	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC101069822	pgr	ENSTRUP00000070462	ENSTRUP00000033392	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Progesterone receptor.	0.916
LOC101073060	LOC101067793	ENSTRUP00000060734	ENSTRUP00000064396	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	NOVA alternative splicing regulator 2.	0.578
LOC101073060	LOC101077619	ENSTRUP00000060734	ENSTRUP00000052329	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	Uncharacterized protein.	0.623
LOC101073060	OTP	ENSTRUP00000060734	ENSTRUP00000046858	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	Orthopedia homeobox.	0.450