(35 nodes) (2013) Insights into food preference in hybrid F1 of Siniperca chuatsi (female) x Siniperca scherzeri (male) mandarin fish through transcriptome analysis. network (Takifugu rubripes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101072043	Guanylate cyclase. (1066 aa)
	LOC778011	Rhodopsin. (353 aa)
	LOC101070860	TSC complex subunit 1b. (1291 aa)
	LOC101074666	Guanylate cyclase. (1081 aa)
	LOC101074895	Nocturnin. (449 aa)
	fosl2	Fos-like antigen 2. (350 aa)
	PER2	Period circadian regulator 2. (1502 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	LOC101073658	Guanylate cyclase. (1046 aa)
	rho	Rhodopsin. (353 aa)
	LOC101071076	Peptide YYa. (95 aa)
	LOC619285	Rhodopsin. (352 aa)
	LOC101074483	Guanylate cyclase. (1056 aa)
	rgr	Retinal G protein coupled receptor b. (297 aa)
	LOC101062194	Uncoupling protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	tas1r1	Taste receptor, type 1, member 2a. (824 aa)
	tas1r2	G_PROTEIN_RECEP_F3_4 domain-containing protein. (845 aa)
	LOC101072570	Guanylate cyclase. (1155 aa)
	LOC101069264	Guanylate cyclase. (1072 aa)
	H2V4V2_TAKRU	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (244 aa)
	scx	Scleraxis bHLH transcription factor a. (212 aa)
	fto	FTO alpha-ketoglutarate dependent dioxygenase. (635 aa)
	LOC101079163	Rhodopsin. (349 aa)
	penk	Proenkephalin a. (276 aa)
	LOC101076332	Peptide YYb. (99 aa)
	ENSTRUP00000063599	Uncharacterized protein. (1317 aa)
	LOC101061913	Period circadian clock 2. (1523 aa)
	gucy2f	Guanylate cyclase. (1094 aa)
	LOC101062907	Guanylate cyclase. (1089 aa)
	LOC101062616	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (240 aa)
	LOC101067716	Nocturnin. (399 aa)
	LOC101068241	Guanylate cyclase. (1084 aa)
	leprot	Leptin receptor gene-related protein; Involved in protein trafficking. May be involved in the down- regulation of membrane protein levels (By similarity). (130 aa)
	CSNK2B	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	tac1	Tachykinin 1. (131 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSNK2B	ENSTRUP00000063599	ENSTRUP00000087465	ENSTRUP00000063599	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Uncharacterized protein.	0.495
CSNK2B	LOC101061913	ENSTRUP00000087465	ENSTRUP00000066372	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Period circadian clock 2.	0.495
CSNK2B	LOC101062616	ENSTRUP00000087465	ENSTRUP00000075376	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.900
CSNK2B	PER2	ENSTRUP00000087465	ENSTRUP00000016743	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Period circadian regulator 2.	0.495
CSNK2B	skp1	ENSTRUP00000087465	ENSTRUP00000019939	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.504
ENSTRUP00000063599	CSNK2B	ENSTRUP00000063599	ENSTRUP00000087465	Uncharacterized protein.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.495
ENSTRUP00000063599	LOC101062616	ENSTRUP00000063599	ENSTRUP00000075376	Uncharacterized protein.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.495
ENSTRUP00000063599	LOC101071076	ENSTRUP00000063599	ENSTRUP00000027005	Uncharacterized protein.	Peptide YYa.	0.406
ENSTRUP00000063599	LOC101076332	ENSTRUP00000063599	ENSTRUP00000063524	Uncharacterized protein.	Peptide YYb.	0.408
ENSTRUP00000063599	fosl2	ENSTRUP00000063599	ENSTRUP00000015666	Uncharacterized protein.	Fos-like antigen 2.	0.431
ENSTRUP00000063599	rgr	ENSTRUP00000063599	ENSTRUP00000030015	Uncharacterized protein.	Retinal G protein coupled receptor b.	0.450
H2V4V2_TAKRU	tac1	ENSTRUP00000044236	ENSTRUP00000088338	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.	Tachykinin 1.	0.497
LOC101061913	CSNK2B	ENSTRUP00000066372	ENSTRUP00000087465	Period circadian clock 2.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.495
LOC101061913	LOC101062616	ENSTRUP00000066372	ENSTRUP00000075376	Period circadian clock 2.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.495
LOC101061913	LOC101071076	ENSTRUP00000066372	ENSTRUP00000027005	Period circadian clock 2.	Peptide YYa.	0.406
LOC101061913	LOC101076332	ENSTRUP00000066372	ENSTRUP00000063524	Period circadian clock 2.	Peptide YYb.	0.408
LOC101061913	fosl2	ENSTRUP00000066372	ENSTRUP00000015666	Period circadian clock 2.	Fos-like antigen 2.	0.431
LOC101061913	rgr	ENSTRUP00000066372	ENSTRUP00000030015	Period circadian clock 2.	Retinal G protein coupled receptor b.	0.450
LOC101062194	LOC101070860	ENSTRUP00000037074	ENSTRUP00000010994	Uncoupling protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.	TSC complex subunit 1b.	0.422
LOC101062194	leprot	ENSTRUP00000037074	ENSTRUP00000086963	Uncoupling protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Leptin receptor gene-related protein; Involved in protein trafficking. May be involved in the down- regulation of membrane protein levels (By similarity).	0.422