16 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101073964	Fibroblast growth factor receptor. (729 aa)
	tcf7	Transcription factor 7. (491 aa)
	edar	Ectodysplasin A receptor. (515 aa)
	scpp3b	SCPP3B. (122 aa)
	LOC115251054	Lymphoid enhancer-binding factor 1-like isoform X1. (315 aa)
	rpl13a	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (228 aa)
	lef1	Lymphoid enhancer-binding factor 1. (377 aa)
	pld1	Phospholipase. (1054 aa)
	fgfr2	Fibroblast growth factor receptor. (838 aa)
	fgfr1	Fibroblast growth factor receptor. (845 aa)
	LOC101066278	Phospholipase. (955 aa)
	scpp5	SCPP5. (173 aa)
	scpp4	Uncharacterized protein. (213 aa)
	scpp3c	Uncharacterized protein. (135 aa)
	scpp1	SCPP1. (214 aa)
	LOC101069674	Phospholipase. (903 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101066278	LOC101069674	ENSTRUP00000041656	ENSTRUP00000013249	Phospholipase.	Phospholipase.	0.427
LOC101066278	pld1	ENSTRUP00000041656	ENSTRUP00000068176	Phospholipase.	Phospholipase.	0.940
LOC101069674	LOC101066278	ENSTRUP00000013249	ENSTRUP00000041656	Phospholipase.	Phospholipase.	0.427
LOC101073964	LOC115251054	ENSTRUP00000047713	ENSTRUP00000076895	Fibroblast growth factor receptor.	Lymphoid enhancer-binding factor 1-like isoform X1.	0.539
LOC101073964	edar	ENSTRUP00000047713	ENSTRUP00000087249	Fibroblast growth factor receptor.	Ectodysplasin A receptor.	0.456
LOC101073964	scpp1	ENSTRUP00000047713	ENSTRUP00000024725	Fibroblast growth factor receptor.	SCPP1.	0.426
LOC101073964	scpp5	ENSTRUP00000047713	ENSTRUP00000025804	Fibroblast growth factor receptor.	SCPP5.	0.490
LOC101073964	tcf7	ENSTRUP00000047713	ENSTRUP00000087486	Fibroblast growth factor receptor.	Transcription factor 7.	0.448
LOC115251054	LOC101073964	ENSTRUP00000076895	ENSTRUP00000047713	Lymphoid enhancer-binding factor 1-like isoform X1.	Fibroblast growth factor receptor.	0.539
LOC115251054	edar	ENSTRUP00000076895	ENSTRUP00000087249	Lymphoid enhancer-binding factor 1-like isoform X1.	Ectodysplasin A receptor.	0.546
LOC115251054	fgfr1	ENSTRUP00000076895	ENSTRUP00000042243	Lymphoid enhancer-binding factor 1-like isoform X1.	Fibroblast growth factor receptor.	0.438
LOC115251054	fgfr2	ENSTRUP00000076895	ENSTRUP00000045145	Lymphoid enhancer-binding factor 1-like isoform X1.	Fibroblast growth factor receptor.	0.440
LOC115251054	lef1	ENSTRUP00000076895	ENSTRUP00000073083	Lymphoid enhancer-binding factor 1-like isoform X1.	Lymphoid enhancer-binding factor 1.	0.514
LOC115251054	scpp1	ENSTRUP00000076895	ENSTRUP00000024725	Lymphoid enhancer-binding factor 1-like isoform X1.	SCPP1.	0.453
LOC115251054	scpp5	ENSTRUP00000076895	ENSTRUP00000025804	Lymphoid enhancer-binding factor 1-like isoform X1.	SCPP5.	0.522
LOC115251054	tcf7	ENSTRUP00000076895	ENSTRUP00000087486	Lymphoid enhancer-binding factor 1-like isoform X1.	Transcription factor 7.	0.429
edar	LOC101073964	ENSTRUP00000087249	ENSTRUP00000047713	Ectodysplasin A receptor.	Fibroblast growth factor receptor.	0.456
edar	LOC115251054	ENSTRUP00000087249	ENSTRUP00000076895	Ectodysplasin A receptor.	Lymphoid enhancer-binding factor 1-like isoform X1.	0.546
edar	fgfr1	ENSTRUP00000087249	ENSTRUP00000042243	Ectodysplasin A receptor.	Fibroblast growth factor receptor.	0.484
edar	fgfr2	ENSTRUP00000087249	ENSTRUP00000045145	Ectodysplasin A receptor.	Fibroblast growth factor receptor.	0.427