14 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101069505	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (306 aa)
	LOC101068736	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (211 aa)
	Rps23	Small subunit ribosomal protein S23e. (154 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (187 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (181 aa)
	rpl10a	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	RPS29	Ribosomal protein S29. (100 aa)
	RPL19	Large subunit ribosomal protein L19e. (204 aa)
	Rpl39	Ribosomal protein L39. (52 aa)
	H2TER7_TAKRU	Ribosomal protein S28. (53 aa)
	RPL5-2	Ribosomal protein L5. (298 aa)
	Rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (85 aa)
	RPL5	Ribosomal protein L5b. (343 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2TER7_TAKRU	LOC101068736	ENSTRUP00000023160	ENSTRUP00000082048	Ribosomal protein S28.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.990
H2TER7_TAKRU	LOC101069505	ENSTRUP00000023160	ENSTRUP00000010856	Ribosomal protein S28.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.999
H2TER7_TAKRU	RPL19	ENSTRUP00000023160	ENSTRUP00000029939	Ribosomal protein S28.	Large subunit ribosomal protein L19e.	0.990
H2TER7_TAKRU	RPL5	ENSTRUP00000023160	ENSTRUP00000001245	Ribosomal protein S28.	Ribosomal protein L5b.	0.992
H2TER7_TAKRU	RPL5-2	ENSTRUP00000023160	ENSTRUP00000011708	Ribosomal protein S28.	Ribosomal protein L5.	0.992
H2TER7_TAKRU	RPS29	ENSTRUP00000023160	ENSTRUP00000031229	Ribosomal protein S28.	Ribosomal protein S29.	0.999
H2TER7_TAKRU	Rpl39	ENSTRUP00000023160	ENSTRUP00000027356	Ribosomal protein S28.	Ribosomal protein L39.	0.999
H2TER7_TAKRU	Rps23	ENSTRUP00000023160	ENSTRUP00000077931	Ribosomal protein S28.	Small subunit ribosomal protein S23e.	0.999
H2TER7_TAKRU	Rps25	ENSTRUP00000023160	ENSTRUP00000001294	Ribosomal protein S28.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
H2TER7_TAKRU	rpl10a	ENSTRUP00000023160	ENSTRUP00000041341	Ribosomal protein S28.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.990
H2TER7_TAKRU	rpl23a	ENSTRUP00000023160	ENSTRUP00000068150	Ribosomal protein S28.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
H2TER7_TAKRU	rpl30	ENSTRUP00000023160	ENSTRUP00000071256	Ribosomal protein S28.	Ribosomal protein L30.	0.999
H2TER7_TAKRU	rps11	ENSTRUP00000023160	ENSTRUP00000068429	Ribosomal protein S28.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.999
LOC101068736	H2TER7_TAKRU	ENSTRUP00000082048	ENSTRUP00000023160	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein S28.	0.990
LOC101068736	LOC101069505	ENSTRUP00000082048	ENSTRUP00000010856	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.989
LOC101068736	RPL19	ENSTRUP00000082048	ENSTRUP00000029939	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Large subunit ribosomal protein L19e.	0.901
LOC101068736	RPL5	ENSTRUP00000082048	ENSTRUP00000001245	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L5b.	0.984
LOC101068736	RPL5-2	ENSTRUP00000082048	ENSTRUP00000011708	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L5.	0.984
LOC101068736	RPS29	ENSTRUP00000082048	ENSTRUP00000031229	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein S29.	0.992
LOC101068736	Rpl39	ENSTRUP00000082048	ENSTRUP00000027356	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L39.	0.995