13 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PYGM	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (856 aa)
	LOC101063574	Myosin light chain 4. (202 aa)
	Ier2	Immediate early response 2b. (169 aa)
	nck2	Cytoplasmic protein. (396 aa)
	nck1	Cytoplasmic protein. (399 aa)
	LOC101077059	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (327 aa)
	LOC101070032	Uncharacterized protein. (288 aa)
	slc26a6	Solute carrier family 26 member 6. (754 aa)
	ENSTRUP00000072583	Myosin light polypeptide 6-like. (157 aa)
	TPM3	Tropomyosin3; Belongs to the tropomyosin family. (355 aa)
	HOOK3	Hook microtubule tethering protein 3. (726 aa)
	pkm	Pyruvate kinase; Belongs to the pyruvate kinase family. (578 aa)
	tpm2	Tropomyosin2; Belongs to the tropomyosin family. (309 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000072583	HOOK3	ENSTRUP00000072583	ENSTRUP00000082654	Myosin light polypeptide 6-like.	Hook microtubule tethering protein 3.	0.528
ENSTRUP00000072583	Ier2	ENSTRUP00000072583	ENSTRUP00000026285	Myosin light polypeptide 6-like.	Immediate early response 2b.	0.424
ENSTRUP00000072583	LOC101070032	ENSTRUP00000072583	ENSTRUP00000058001	Myosin light polypeptide 6-like.	Uncharacterized protein.	0.812
ENSTRUP00000072583	PYGM	ENSTRUP00000072583	ENSTRUP00000063227	Myosin light polypeptide 6-like.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.439
ENSTRUP00000072583	TPM3	ENSTRUP00000072583	ENSTRUP00000078331	Myosin light polypeptide 6-like.	Tropomyosin3; Belongs to the tropomyosin family.	0.722
ENSTRUP00000072583	slc26a6	ENSTRUP00000072583	ENSTRUP00000068585	Myosin light polypeptide 6-like.	Solute carrier family 26 member 6.	0.415
ENSTRUP00000072583	tpm2	ENSTRUP00000072583	ENSTRUP00000087054	Myosin light polypeptide 6-like.	Tropomyosin2; Belongs to the tropomyosin family.	0.725
HOOK3	ENSTRUP00000072583	ENSTRUP00000082654	ENSTRUP00000072583	Hook microtubule tethering protein 3.	Myosin light polypeptide 6-like.	0.528
HOOK3	Ier2	ENSTRUP00000082654	ENSTRUP00000026285	Hook microtubule tethering protein 3.	Immediate early response 2b.	0.450
HOOK3	LOC101063574	ENSTRUP00000082654	ENSTRUP00000016130	Hook microtubule tethering protein 3.	Myosin light chain 4.	0.500
HOOK3	LOC101070032	ENSTRUP00000082654	ENSTRUP00000058001	Hook microtubule tethering protein 3.	Uncharacterized protein.	0.505
HOOK3	slc26a6	ENSTRUP00000082654	ENSTRUP00000068585	Hook microtubule tethering protein 3.	Solute carrier family 26 member 6.	0.438
Ier2	ENSTRUP00000072583	ENSTRUP00000026285	ENSTRUP00000072583	Immediate early response 2b.	Myosin light polypeptide 6-like.	0.424
Ier2	HOOK3	ENSTRUP00000026285	ENSTRUP00000082654	Immediate early response 2b.	Hook microtubule tethering protein 3.	0.450
Ier2	LOC101070032	ENSTRUP00000026285	ENSTRUP00000058001	Immediate early response 2b.	Uncharacterized protein.	0.424
Ier2	PYGM	ENSTRUP00000026285	ENSTRUP00000063227	Immediate early response 2b.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.450
Ier2	pkm	ENSTRUP00000026285	ENSTRUP00000083581	Immediate early response 2b.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.451
LOC101063574	HOOK3	ENSTRUP00000016130	ENSTRUP00000082654	Myosin light chain 4.	Hook microtubule tethering protein 3.	0.500
LOC101063574	LOC101070032	ENSTRUP00000016130	ENSTRUP00000058001	Myosin light chain 4.	Uncharacterized protein.	0.789
LOC101063574	TPM3	ENSTRUP00000016130	ENSTRUP00000078331	Myosin light chain 4.	Tropomyosin3; Belongs to the tropomyosin family.	0.684