20 items (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101075779	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)
	trim65	Tripartite motif containing 65. (508 aa)
	ENSTRUP00000058317	Polyubiquitin-like. (110 aa)
	traf3	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (614 aa)
	LOC101064444	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (597 aa)
	irf7	Interferon regulatory factor 7. (469 aa)
	nck2	Cytoplasmic protein. (396 aa)
	LOC101064351	Tripartite motif containing 62, tandem duplicate 1. (475 aa)
	il1b	Interleukin-1; Belongs to the IL-1 family. (256 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (564 aa)
	nck1	Cytoplasmic protein. (399 aa)
	traf2	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (520 aa)
	tlr3	Toll-like receptor 3. (913 aa)
	trim23	Tripartite motif containing 23. (632 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (288 aa)
	Trim32	Tripartite motif containing 32. (653 aa)
	traf4	TNF receptor-associated factor. (470 aa)
	trim13	Tripartite motif containing 13. (403 aa)
	ENSTRUP00000005140	TANK-binding kinase 1. (603 aa)
	LOC101076539	Tripartite motif containing 25. (610 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000005140	ENSTRUP00000058317	ENSTRUP00000005140	ENSTRUP00000058317	TANK-binding kinase 1.	Polyubiquitin-like.	0.698
ENSTRUP00000005140	LOC101064444	ENSTRUP00000005140	ENSTRUP00000015634	TANK-binding kinase 1.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.769
ENSTRUP00000005140	LOC101075779	ENSTRUP00000005140	ENSTRUP00000062874	TANK-binding kinase 1.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.769
ENSTRUP00000005140	LOC101076539	ENSTRUP00000005140	ENSTRUP00000006703	TANK-binding kinase 1.	Tripartite motif containing 25.	0.535
ENSTRUP00000005140	irf7	ENSTRUP00000005140	ENSTRUP00000028840	TANK-binding kinase 1.	Interferon regulatory factor 7.	0.744
ENSTRUP00000005140	myd88	ENSTRUP00000005140	ENSTRUP00000050655	TANK-binding kinase 1.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.750
ENSTRUP00000005140	tlr3	ENSTRUP00000005140	ENSTRUP00000049383	TANK-binding kinase 1.	Toll-like receptor 3.	0.716
ENSTRUP00000005140	traf2	ENSTRUP00000005140	ENSTRUP00000047803	TANK-binding kinase 1.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.769
ENSTRUP00000005140	traf3	ENSTRUP00000005140	ENSTRUP00000013353	TANK-binding kinase 1.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.950
ENSTRUP00000005140	traf4	ENSTRUP00000005140	ENSTRUP00000056400	TANK-binding kinase 1.	TNF receptor-associated factor.	0.544
ENSTRUP00000005140	traf6	ENSTRUP00000005140	ENSTRUP00000041697	TANK-binding kinase 1.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.932
ENSTRUP00000005140	trim23	ENSTRUP00000005140	ENSTRUP00000050260	TANK-binding kinase 1.	Tripartite motif containing 23.	0.428
ENSTRUP00000058317	ENSTRUP00000005140	ENSTRUP00000058317	ENSTRUP00000005140	Polyubiquitin-like.	TANK-binding kinase 1.	0.698
ENSTRUP00000058317	LOC101064444	ENSTRUP00000058317	ENSTRUP00000015634	Polyubiquitin-like.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.480
ENSTRUP00000058317	LOC101075779	ENSTRUP00000058317	ENSTRUP00000062874	Polyubiquitin-like.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.480
ENSTRUP00000058317	LOC101076539	ENSTRUP00000058317	ENSTRUP00000006703	Polyubiquitin-like.	Tripartite motif containing 25.	0.610
ENSTRUP00000058317	il1b	ENSTRUP00000058317	ENSTRUP00000040920	Polyubiquitin-like.	Interleukin-1; Belongs to the IL-1 family.	0.433
ENSTRUP00000058317	irf7	ENSTRUP00000058317	ENSTRUP00000028840	Polyubiquitin-like.	Interferon regulatory factor 7.	0.499
ENSTRUP00000058317	myd88	ENSTRUP00000058317	ENSTRUP00000050655	Polyubiquitin-like.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.605
ENSTRUP00000058317	tlr3	ENSTRUP00000058317	ENSTRUP00000049383	Polyubiquitin-like.	Toll-like receptor 3.	0.490