(18 nodes) In Between Ring fingers network (Takifugu rubripes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf19b	RBR-type E3 ubiquitin transferase. (727 aa)
	ankib1	RBR-type E3 ubiquitin transferase. (1112 aa)
	rnf19a	RBR-type E3 ubiquitin transferase. (913 aa)
	LOC101065005	RBR-type E3 ubiquitin transferase. (636 aa)
	arih2	RBR-type E3 ubiquitin transferase. (510 aa)
	prkn	Ubiquitin-like domain-containing protein. (532 aa)
	fbxo5	F-box protein 5. (438 aa)
	LOC101065618	E3 ubiquitin-protein ligase RNF31-like isoform X1. (704 aa)
	LOC101067518	RBR-type E3 ubiquitin transferase. (552 aa)
	rnf144a	RBR-type E3 ubiquitin transferase. (295 aa)
	rnf31	Uncharacterized protein. (1091 aa)
	FBXO43	F-box protein 43. (605 aa)
	LOC101079511	RBR-type E3 ubiquitin transferase. (310 aa)
	LOC101077719	RBR-type E3 ubiquitin transferase. (1312 aa)
	rnf14	RBR-type E3 ubiquitin transferase. (506 aa)
	LOC101065390	RBR-type E3 ubiquitin transferase. (860 aa)
	LOC115247907	Si:dkey-181m9.8. (704 aa)
	CUL7	Cullin 7; Belongs to the cullin family. (2597 aa)

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL7	LOC101065618	ENSTRUP00000004312	ENSTRUP00000053132	Cullin 7; Belongs to the cullin family.	E3 ubiquitin-protein ligase RNF31-like isoform X1.	0.434
CUL7	LOC115247907	ENSTRUP00000004312	ENSTRUP00000010647	Cullin 7; Belongs to the cullin family.	Si:dkey-181m9.8.	0.434
CUL7	arih2	ENSTRUP00000004312	ENSTRUP00000063158	Cullin 7; Belongs to the cullin family.	RBR-type E3 ubiquitin transferase.	0.434
CUL7	rnf31	ENSTRUP00000004312	ENSTRUP00000045452	Cullin 7; Belongs to the cullin family.	Uncharacterized protein.	0.434
LOC101065005	LOC101065618	ENSTRUP00000066224	ENSTRUP00000053132	RBR-type E3 ubiquitin transferase.	E3 ubiquitin-protein ligase RNF31-like isoform X1.	0.434
LOC101065005	LOC115247907	ENSTRUP00000066224	ENSTRUP00000010647	RBR-type E3 ubiquitin transferase.	Si:dkey-181m9.8.	0.434
LOC101065005	arih2	ENSTRUP00000066224	ENSTRUP00000063158	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.454
LOC101065005	rnf31	ENSTRUP00000066224	ENSTRUP00000045452	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.434
LOC101065390	LOC101065618	ENSTRUP00000014184	ENSTRUP00000053132	RBR-type E3 ubiquitin transferase.	E3 ubiquitin-protein ligase RNF31-like isoform X1.	0.434
LOC101065390	LOC115247907	ENSTRUP00000014184	ENSTRUP00000010647	RBR-type E3 ubiquitin transferase.	Si:dkey-181m9.8.	0.434
LOC101065390	arih2	ENSTRUP00000014184	ENSTRUP00000063158	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.454
LOC101065390	rnf31	ENSTRUP00000014184	ENSTRUP00000045452	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.434
LOC101065618	CUL7	ENSTRUP00000053132	ENSTRUP00000004312	E3 ubiquitin-protein ligase RNF31-like isoform X1.	Cullin 7; Belongs to the cullin family.	0.434
LOC101065618	LOC101065005	ENSTRUP00000053132	ENSTRUP00000066224	E3 ubiquitin-protein ligase RNF31-like isoform X1.	RBR-type E3 ubiquitin transferase.	0.434
LOC101065618	LOC101065390	ENSTRUP00000053132	ENSTRUP00000014184	E3 ubiquitin-protein ligase RNF31-like isoform X1.	RBR-type E3 ubiquitin transferase.	0.434
LOC101065618	LOC101077719	ENSTRUP00000053132	ENSTRUP00000022708	E3 ubiquitin-protein ligase RNF31-like isoform X1.	RBR-type E3 ubiquitin transferase.	0.434
LOC101065618	LOC101079511	ENSTRUP00000053132	ENSTRUP00000023449	E3 ubiquitin-protein ligase RNF31-like isoform X1.	RBR-type E3 ubiquitin transferase.	0.434
LOC101065618	LOC115247907	ENSTRUP00000053132	ENSTRUP00000010647	E3 ubiquitin-protein ligase RNF31-like isoform X1.	Si:dkey-181m9.8.	0.900
LOC101065618	ankib1	ENSTRUP00000053132	ENSTRUP00000086559	E3 ubiquitin-protein ligase RNF31-like isoform X1.	RBR-type E3 ubiquitin transferase.	0.434
LOC101065618	rnf144a	ENSTRUP00000053132	ENSTRUP00000049517	E3 ubiquitin-protein ligase RNF31-like isoform X1.	RBR-type E3 ubiquitin transferase.	0.434