STRINGSTRING
LMX1B LMX1B SHH SHH FERD3L FERD3L IHH IHH LMX1A LMX1A NKX2-2 NKX2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LMX1BLIM homeobox transcription factor 1-beta isoform X1. (402 aa)
SHHLOW QUALITY PROTEIN: sonic hedgehog protein. (271 aa)
FERD3LFer3-like protein. (163 aa)
IHHIndian hedgehog protein. (309 aa)
LMX1ALIM homeobox transcription factor 1-alpha. (382 aa)
NKX2-2Homeobox protein Nkx-2.2. (273 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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