STRINGSTRING
LOC103012673 LOC103012673 WDR61 WDR61 CBX3 CBX3 EXOSC10 EXOSC10 UHRF1 UHRF1 RUVBL2 RUVBL2 SIRT1 SIRT1 RNF2 RNF2 EXOSC4 EXOSC4 POLR2A POLR2A NR1H4 NR1H4 LOC103001311 LOC103001311 LOC103014668 LOC103014668 KMT2E KMT2E LOC103015295 LOC103015295 EXOSC5 EXOSC5 TCF3 TCF3 TRIM28 TRIM28 CTR9 CTR9 SP1 SP1 RBMX RBMX ALKBH1 ALKBH1 CBX2 CBX2 LOC103007512 LOC103007512 POU4F2 POU4F2 BCAS3 BCAS3 DNMT3A DNMT3A ICE1 ICE1 SETD5 SETD5 HIF1A HIF1A CTNNB1 CTNNB1 ELL ELL EXOSC3 EXOSC3 ZC3H8 ZC3H8 TTC37 TTC37 CREB1 CREB1 ESR1 ESR1 LOC114235831 LOC114235831 MYOD1 MYOD1 PSIP1 PSIP1 LOC103015020 LOC103015020 ICE2 ICE2 AFF4 AFF4 PELP1 PELP1 TRIM24 TRIM24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103012673Protein-arginine deiminase type-2. (647 aa)
WDR61WD repeat-containing protein 61. (305 aa)
CBX3Chromobox protein homolog 3. (183 aa)
EXOSC10LOW QUALITY PROTEIN: exosome component 10. (887 aa)
UHRF1E3 ubiquitin-protein ligase UHRF1. (750 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (538 aa)
SIRT1NAD-dependent protein deacetylase sirtuin-1 isoform X1. (557 aa)
RNF2E3 ubiquitin-protein ligase RING2 isoform X1. (344 aa)
EXOSC4Exosome complex component RRP41. (245 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1963 aa)
NR1H4Bile acid receptor isoform X1. (486 aa)
LOC103001311Transcription factor AP-1-like. (199 aa)
LOC103014668Transcription factor AP-1; Belongs to the bZIP family. (253 aa)
KMT2EInactive histone-lysine N-methyltransferase 2E. (1786 aa)
LOC103015295Histone H1.2. (213 aa)
EXOSC5Exosome complex component RRP46. (235 aa)
TCF3Transcription factor E2-alpha isoform X4. (645 aa)
TRIM28Transcription intermediary factor 1-beta. (700 aa)
CTR9RNA polymerase-associated protein CTR9 homolog. (1179 aa)
SP1Transcription factor Sp1. (787 aa)
RBMXRNA-binding motif protein, X chromosome. (391 aa)
ALKBH1Nucleic acid dioxygenase ALKBH1 isoform X1. (390 aa)
CBX2Chromobox protein homolog 2. (494 aa)
LOC103007512RNA-binding motif protein, X chromosome-like. (384 aa)
POU4F2POU domain protein. (408 aa)
BCAS3Breast carcinoma-amplified sequence 3 isoform X1. (924 aa)
DNMT3ADNA (Cytosine-5)-methyltransferase 3A; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (910 aa)
ICE1Little elongation complex subunit 1. (2239 aa)
SETD5SET domain-containing protein 5 isoform X1. (1497 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X1. (823 aa)
CTNNB1Catenin beta-1. (767 aa)
ELLRNA polymerase II elongation factor ELL. (612 aa)
EXOSC3Exosome complex component RRP40 isoform X1. (275 aa)
ZC3H8Zinc finger CCCH domain-containing protein 8 isoform X1. (309 aa)
TTC37Tetratricopeptide repeat protein 37. (1562 aa)
CREB1Cyclic AMP-responsive element-binding protein 1 isoform X1. (341 aa)
ESR1LOW QUALITY PROTEIN: estrogen receptor. (422 aa)
LOC114235831Estrogen receptor-like. (144 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (268 aa)
PSIP1PC4 and SFRS1-interacting protein isoform X1. (530 aa)
LOC103015020Cat eye syndrome critical region protein 2 isoform X2. (1230 aa)
ICE2Little elongation complex subunit 2 isoform X1. (1001 aa)
AFF4LOW QUALITY PROTEIN: AF4/FMR2 family member 4. (1164 aa)
PELP1Proline-, glutamic acid- and leucine-rich protein 1 isoform X2. (1151 aa)
TRIM24Transcription intermediary factor 1-alpha. (944 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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