STRINGSTRING
CER1 CER1 LAMB3 LAMB3 COL8A1 COL8A1 PLPP3 PLPP3 GPI GPI SMAD3 SMAD3 MAP2K1 MAP2K1 DVL2 DVL2 CUL3 CUL3 LMBRD1 LMBRD1 RNF2 RNF2 MIXL1 MIXL1 MMP2 MMP2 MMP15 MMP15 COL12A1 COL12A1 SETD2 SETD2 SOX17 SOX17 COL7A1 COL7A1 COL11A1 COL11A1 WNT3A WNT3A RIC8A RIC8A HOXA11 HOXA11 FOXF1 FOXF1 TBX19 TBX19 POFUT2 POFUT2 COL6A1 COL6A1 TAF10 TAF10 RACK1 RACK1 DUSP5 DUSP5 DUSP4 DUSP4 BMPR1A BMPR1A LOC103006469 LOC103006469 CTR9 CTR9 NR0B1 NR0B1 EPHA2 EPHA2 ATOH8 ATOH8 ITGB3 ITGB3 WNT3 WNT3 ZIC3 ZIC3 EXOC4 EXOC4 SYF2 SYF2 UGDH UGDH HMGA2 HMGA2 ITGA5 ITGA5 PAF1 PAF1 RTF1 RTF1 MMP14 MMP14 NPHP3 NPHP3 EPB41L5 EPB41L5 POGLUT1 POGLUT1 AXIN1 AXIN1 PRKACA PRKACA SFRP1 SFRP1 MSGN1 MSGN1 AMOT AMOT VTN VTN HNF1A HNF1A TLX2 TLX2 EYA1 EYA1 ARFRP1 ARFRP1 SNAI1 SNAI1 BMP7 BMP7 MMP9 MMP9 PRKAR1A PRKAR1A ITGB4 ITGB4 GRB2 GRB2 TBX6 TBX6 LDB1 LDB1 FGF8 FGF8 TENM4 TENM4 INHBA INHBA FN1 FN1 EXT1 EXT1 SMAD1 SMAD1 SFRP2 SFRP2 LHX1 LHX1 SIX2 SIX2 ITGA4 ITGA4 DUSP1 DUSP1 BMPR2 BMPR2 MMP8 MMP8 EOMES EOMES TASOR TASOR SOX7 SOX7 LOC103001360 LOC103001360 OTX2 OTX2 BMP4 BMP4 CTNNB1 CTNNB1 WNT11 WNT11 LOC103015737 LOC103015737 CRB2 CRB2 LEO1 LEO1 FRS2 FRS2 ITGA2 ITGA2 TWSG1 TWSG1 ITGA8 ITGA8 NANOG NANOG COL4A2 COL4A2 SMAD4 SMAD4 DUSP2 DUSP2 GATA6 GATA6 LOC103012309 LOC103012309 LAMA3 LAMA3 APLNR APLNR SRF SRF NODAL NODAL MEGF8 MEGF8 LRP5 LRP5 LRP5L LRP5L NF2 NF2 TAL1 TAL1 ITGB5 ITGB5 NOG NOG ITGA3 ITGA3 ETV2 ETV2 LOC103010385 LOC103010385 ITGA7 ITGA7 HAND1 HAND1 EXT2 EXT2 APELA APELA TBXT TBXT ARMC5 ARMC5 DVL1 DVL1 ITGAV ITGAV
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CER1Cerberus. (273 aa)
LAMB3Laminin subunit beta-3. (1172 aa)
COL8A1Collagen alpha-1(VIII) chain. (744 aa)
PLPP3Phospholipid phosphatase 3. (312 aa)
GPIGlucose-6-phosphate isomerase; Belongs to the GPI family. (558 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
MAP2K1Dual specificity mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (393 aa)
DVL2Segment polarity protein dishevelled homolog DVL-2. (734 aa)
CUL3Cullin-3; Belongs to the cullin family. (746 aa)
LMBRD1Probable lysosomal cobalamin transporter. (468 aa)
RNF2E3 ubiquitin-protein ligase RING2 isoform X1. (344 aa)
MIXL1Homeobox protein MIXL1. (187 aa)
MMP272 kDa type IV collagenase. (584 aa)
MMP15Matrix metalloproteinase-15. (573 aa)
COL12A1Collagen alpha-1(XII) chain isoform X1. (3120 aa)
SETD2Histone-lysine N-methyltransferase SETD2 isoform X1. (2518 aa)
SOX17Transcription factor SOX-17. (296 aa)
COL7A1Collagen alpha-1(VII) chain. (3013 aa)
COL11A1Collagen alpha-1(XI) chain. (1805 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
RIC8Asynembryn-A. (420 aa)
HOXA11Homeobox protein Hox-A11. (314 aa)
FOXF1Forkhead box protein F1. (354 aa)
TBX19T-box transcription factor TBX19. (444 aa)
POFUT2GDP-fucose protein O-fucosyltransferase 2. (429 aa)
COL6A1LOW QUALITY PROTEIN: collagen alpha-1(VI) chain. (1005 aa)
TAF10Transcription initiation factor TFIID subunit 10. (177 aa)
RACK1Receptor of activated protein C kinase 1 isoform X1. (317 aa)
DUSP5Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (329 aa)
DUSP4Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (396 aa)
BMPR1AReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
LOC103006469Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (152 aa)
CTR9RNA polymerase-associated protein CTR9 homolog. (1179 aa)
NR0B1LOW QUALITY PROTEIN: nuclear receptor subfamily 0 group B member 1. (463 aa)
EPHA2Ephrin type-A receptor 2. (975 aa)
ATOH8LOW QUALITY PROTEIN: protein atonal homolog 8. (316 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (741 aa)
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
ZIC3Zinc finger protein ZIC 3. (163 aa)
EXOC4Exocyst complex component 4. (975 aa)
SYF2pre-mRNA-splicing factor SYF2. (245 aa)
UGDHUDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (494 aa)
HMGA2High mobility group protein HMGI-C. (109 aa)
ITGA5Integrin alpha-5; Belongs to the integrin alpha chain family. (1108 aa)
PAF1RNA polymerase II-associated factor 1 homolog. (526 aa)
RTF1RNA polymerase-associated protein RTF1 homolog. (710 aa)
MMP14Matrix metalloproteinase-14. (582 aa)
NPHP3Nephrocystin-3 isoform X1. (1191 aa)
EPB41L5Band 4.1-like protein 5. (805 aa)
POGLUT1Protein O-glucosyltransferase 1 isoform X1. (392 aa)
AXIN1Axin-1 isoform X1. (866 aa)
PRKACAcAMP-dependent protein kinase catalytic subunit alpha. (293 aa)
SFRP1Secreted frizzled-related protein 1. (295 aa)
MSGN1Mesogenin-1. (193 aa)
AMOTAngiomotin. (951 aa)
VTNVitronectin. (508 aa)
HNF1AHepatocyte nuclear factor 1-alpha isoform X1. (632 aa)
TLX2T-cell leukemia homeobox protein 2. (284 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (584 aa)
ARFRP1ADP-ribosylation factor-related protein 1 isoform X1. (201 aa)
SNAI1Zinc finger protein SNAI1. (264 aa)
BMP7Bone morphogenetic protein 7. (431 aa)
MMP9LOW QUALITY PROTEIN: matrix metalloproteinase-9. (706 aa)
PRKAR1AcAMP-dependent protein kinase type I-alpha regulatory subunit. (380 aa)
ITGB4Integrin beta. (1804 aa)
GRB2Growth factor receptor-bound protein 2. (217 aa)
TBX6T-box transcription factor TBX6. (436 aa)
LDB1LIM domain-binding protein 1 isoform X2. (375 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (244 aa)
TENM4Teneurin-4. (2739 aa)
INHBAInhibin beta A chain. (425 aa)
FN1Fibronectin. (2376 aa)
EXT1Exostosin-1; Belongs to the glycosyltransferase 47 family. (746 aa)
SMAD1Mothers against decapentaplegic homolog. (465 aa)
SFRP2Secreted frizzled-related protein 2. (294 aa)
LHX1LIM/homeobox protein Lhx1. (406 aa)
SIX2Homeobox protein SIX2 isoform X1. (298 aa)
ITGA4Integrin alpha-4; Belongs to the integrin alpha chain family. (1033 aa)
DUSP1Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (367 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
MMP8Neutrophil collagenase. (468 aa)
EOMESEomesodermin homolog isoform X1. (419 aa)
TASORProtein TASOR isoform X1. (1672 aa)
SOX7Transcription factor SOX-7. (205 aa)
LOC103001360Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (204 aa)
OTX2Homeobox protein OTX2. (289 aa)
BMP4Bone morphogenetic protein 4 isoform X1. (420 aa)
CTNNB1Catenin beta-1. (767 aa)
WNT11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
LOC103015737Mesoderm posterior protein 1. (126 aa)
CRB2Protein crumbs homolog 2. (1075 aa)
LEO1RNA polymerase-associated protein LEO1. (666 aa)
FRS2Fibroblast growth factor receptor substrate 2. (508 aa)
ITGA2Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
TWSG1Twisted gastrulation protein homolog 1 isoform X1. (223 aa)
ITGA8LOW QUALITY PROTEIN: integrin alpha-8; Belongs to the integrin alpha chain family. (1060 aa)
NANOGHomeobox protein NANOG isoform X1. (307 aa)
COL4A2Collagen alpha-2(IV) chain. (1712 aa)
SMAD4Mothers against decapentaplegic homolog. (553 aa)
DUSP2Dual specificity protein phosphatase 2; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (161 aa)
GATA6Transcription factor GATA-6. (357 aa)
LOC103012309Laminin subunit alpha-3. (742 aa)
LAMA3Laminin subunit alpha-3. (2402 aa)
APLNRApelin receptor; Belongs to the G-protein coupled receptor 1 family. (400 aa)
SRFSerum response factor. (464 aa)
NODALNodal homolog. (280 aa)
MEGF8Multiple epidermal growth factor-like domains protein 8. (2787 aa)
LRP5Low-density lipoprotein receptor-related protein 5. (1080 aa)
LRP5LLOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 5-like protein. (469 aa)
NF2Merlin isoform X4. (619 aa)
TAL1T-cell acute lymphocytic leukemia protein 1. (172 aa)
ITGB5Integrin beta; Belongs to the integrin beta chain family. (800 aa)
NOGNoggin. (154 aa)
ITGA3Integrin alpha-3; Belongs to the integrin alpha chain family. (1048 aa)
ETV2ETS translocation variant 2 isoform X1. (333 aa)
LOC103010385LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF2-like. (236 aa)
ITGA7Integrin alpha-7 isoform X8; Belongs to the integrin alpha chain family. (1181 aa)
HAND1Heart- and neural crest derivatives-expressed protein 1 isoform X1. (217 aa)
EXT2Exostosin-2; Belongs to the glycosyltransferase 47 family. (770 aa)
APELAApelin receptor early endogenous ligand isoform X1. (89 aa)
TBXTT-box transcription factor T isoform X2. (436 aa)
ARMC5LOW QUALITY PROTEIN: armadillo repeat-containing protein 5. (847 aa)
DVL1LOW QUALITY PROTEIN: segment polarity protein dishevelled homolog DVL-1. (681 aa)
ITGAVIntegrin alpha-V isoform X1; Belongs to the integrin alpha chain family. (985 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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