9 items (Balaenoptera acutorostrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103011863	Cytochrome P450 2G1; Belongs to the cytochrome P450 family. (494 aa)
	LOC102997947	Cytochrome P450 2E1 isoform X1; Belongs to the cytochrome P450 family. (495 aa)
	LOC103017669	Cytochrome P450 2C23-like; Belongs to the cytochrome P450 family. (504 aa)
	LOC103008057	Cytochrome P450 1A1 isoform X1; Belongs to the cytochrome P450 family. (516 aa)
	LOC103018236	Cytochrome P450 2C18-like. (254 aa)
	LOC102998555	LOW QUALITY PROTEIN: cytochrome P450 2A13-like. (479 aa)
	LOC103011560	LOW QUALITY PROTEIN: cytochrome P450 2S1-like; Belongs to the cytochrome P450 family. (494 aa)
	LOC102999115	LOW QUALITY PROTEIN: cytochrome P450 2F3. (433 aa)
	LOC102999399	LOW QUALITY PROTEIN: cytochrome P450 2F2-like. (558 aa)

Your Current Organism:

Balaenoptera acutorostrata

NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102997947	LOC103008057	A0A383ZDY0	A0A384BES5	Cytochrome P450 2E1 isoform X1; Belongs to the cytochrome P450 family.	Cytochrome P450 1A1 isoform X1; Belongs to the cytochrome P450 family.	0.922
LOC102997947	LOC103017669	A0A383ZDY0	A0A384AJ95	Cytochrome P450 2E1 isoform X1; Belongs to the cytochrome P450 family.	Cytochrome P450 2C23-like; Belongs to the cytochrome P450 family.	0.905
LOC103008057	LOC102997947	A0A384BES5	A0A383ZDY0	Cytochrome P450 1A1 isoform X1; Belongs to the cytochrome P450 family.	Cytochrome P450 2E1 isoform X1; Belongs to the cytochrome P450 family.	0.922
LOC103008057	LOC103017669	A0A384BES5	A0A384AJ95	Cytochrome P450 1A1 isoform X1; Belongs to the cytochrome P450 family.	Cytochrome P450 2C23-like; Belongs to the cytochrome P450 family.	0.921
LOC103017669	LOC102997947	A0A384AJ95	A0A383ZDY0	Cytochrome P450 2C23-like; Belongs to the cytochrome P450 family.	Cytochrome P450 2E1 isoform X1; Belongs to the cytochrome P450 family.	0.905
LOC103017669	LOC103008057	A0A384AJ95	A0A384BES5	Cytochrome P450 2C23-like; Belongs to the cytochrome P450 family.	Cytochrome P450 1A1 isoform X1; Belongs to the cytochrome P450 family.	0.921