STRINGSTRING
WNT3 WNT3 AXIN1 AXIN1 SFRP1 SFRP1 CTNNB1 CTNNB1 MDFI MDFI VAX2 VAX2 PAX6 PAX6 SMAD6 SMAD6 BMPR1A BMPR1A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
AXIN1Axin-1 isoform X1. (866 aa)
SFRP1Secreted frizzled-related protein 1. (295 aa)
CTNNB1Catenin beta-1. (767 aa)
MDFImyoD family inhibitor. (246 aa)
VAX2Ventral anterior homeobox 2. (340 aa)
PAX6Paired box protein Pax-6 isoform X1. (493 aa)
SMAD6Mothers against decapentaplegic homolog. (321 aa)
BMPR1AReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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