STRINGSTRING
LOXL2 LOXL2 GDF6 GDF6 SMAD3 SMAD3 PKDCC PKDCC HOXA11 HOXA11 ZBTB16 ZBTB16 MUSTN1 MUSTN1 SOX6 SOX6 ZNF219 ZNF219 SOX9 SOX9 GLI3 GLI3 GDF5 GDF5 RUNX2 RUNX2 PTGDS PTGDS SOX5 SOX5 SMAD7 SMAD7 FGF18 FGF18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOXL2Lysyl oxidase homolog 2. (774 aa)
GDF6Growth/differentiation factor 6. (375 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
PKDCCExtracellular tyrosine-protein kinase PKDCC. (371 aa)
HOXA11Homeobox protein Hox-A11. (314 aa)
ZBTB16Zinc finger and BTB domain-containing protein 16 isoform X1. (673 aa)
MUSTN1Musculoskeletal embryonic nuclear protein 1. (82 aa)
SOX6Transcription factor SOX-6 isoform X1. (842 aa)
ZNF219Zinc finger protein 219 isoform X1. (716 aa)
SOX9Transcription factor SOX-9. (432 aa)
GLI3Transcriptional activator GLI3 isoform X1. (1591 aa)
GDF5Growth/differentiation factor 5. (511 aa)
RUNX2Runt-related transcription factor 2. (343 aa)
PTGDSprostaglandin-H2 D-isomerase isoform X1; Belongs to the calycin superfamily. Lipocalin family. (202 aa)
SOX5Transcription factor SOX-5 isoform X1. (729 aa)
SMAD7Mothers against decapentaplegic homolog. (426 aa)
FGF18Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (278 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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