STRINGSTRING
SCARB1 SCARB1 LOC103008831 LOC103008831 TREM2 TREM2 ABCA1 ABCA1 ABCA2 ABCA2 LCAT LCAT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCARB1Scavenger receptor class B member 1; Belongs to the CD36 family. (487 aa)
LOC103008831ATP-binding cassette sub-family A member 1-like. (119 aa)
TREM2Triggering receptor expressed on myeloid cells 2. (230 aa)
ABCA1ATP-binding cassette sub-family A member 1 isoform X1. (2264 aa)
ABCA2ATP-binding cassette sub-family A member 2. (2133 aa)
LCATPhosphatidylcholine-sterol acyltransferase. (440 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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