17 items (Balaenoptera acutorostrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBX6	Chromobox protein homolog 6 isoform X1. (415 aa)
	RING1	E3 ubiquitin-protein ligase RING1. (406 aa)
	CBX2	Chromobox protein homolog 2. (494 aa)
	CBX4	E3 SUMO-protein ligase CBX4. (454 aa)
	CBX8	Chromobox protein homolog 8. (371 aa)
	PCGF1	Polycomb group RING finger protein 1. (259 aa)
	PHC2	LOW QUALITY PROTEIN: polyhomeotic-like protein 2. (851 aa)
	PCGF3	Polycomb group RING finger protein 3 isoform X1. (242 aa)
	RNF2	E3 ubiquitin-protein ligase RING2 isoform X1. (344 aa)
	PCGF2	Polycomb group RING finger protein 2 isoform X1. (345 aa)
	CBX7	Chromobox protein homolog 7 isoform X1. (251 aa)
	BMI1	Polycomb complex protein BMI-1. (326 aa)
	PHC1	Polyhomeotic-like protein 1. (997 aa)
	PHC3	Polyhomeotic-like protein 3 isoform X1. (1012 aa)
	LOC103003208	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like. (406 aa)
	PCGF6	Polycomb group RING finger protein 6 isoform X1. (364 aa)
	PCGF5	Polycomb group RING finger protein 5 isoform X1. (256 aa)

Your Current Organism:

Balaenoptera acutorostrata

NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMI1	CBX2	A0A384ARD7	A0A384AFL3	Polycomb complex protein BMI-1.	Chromobox protein homolog 2.	0.956
BMI1	CBX4	A0A384ARD7	A0A384AFD0	Polycomb complex protein BMI-1.	E3 SUMO-protein ligase CBX4.	0.969
BMI1	CBX6	A0A384ARD7	A0A452CM28	Polycomb complex protein BMI-1.	Chromobox protein homolog 6 isoform X1.	0.827
BMI1	CBX7	A0A384ARD7	A0A384AP80	Polycomb complex protein BMI-1.	Chromobox protein homolog 7 isoform X1.	0.846
BMI1	CBX8	A0A384ARD7	A0A384AEV3	Polycomb complex protein BMI-1.	Chromobox protein homolog 8.	0.970
BMI1	LOC103003208	A0A384ARD7	A0A452CG21	Polycomb complex protein BMI-1.	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like.	0.950
BMI1	PCGF2	A0A384ARD7	A0A383ZRN6	Polycomb complex protein BMI-1.	Polycomb group RING finger protein 2 isoform X1.	0.891
BMI1	PCGF3	A0A384ARD7	A0A384A2G8	Polycomb complex protein BMI-1.	Polycomb group RING finger protein 3 isoform X1.	0.526
BMI1	PCGF5	A0A384ARD7	A0A384AJL9	Polycomb complex protein BMI-1.	Polycomb group RING finger protein 5 isoform X1.	0.571
BMI1	PHC1	A0A384ARD7	A0A384B9G7	Polycomb complex protein BMI-1.	Polyhomeotic-like protein 1.	0.744
BMI1	PHC2	A0A384ARD7	A0A384A5E6	Polycomb complex protein BMI-1.	LOW QUALITY PROTEIN: polyhomeotic-like protein 2.	0.685
BMI1	PHC3	A0A384ARD7	A0A384BCY0	Polycomb complex protein BMI-1.	Polyhomeotic-like protein 3 isoform X1.	0.854
BMI1	RING1	A0A384ARD7	A0A384AHY5	Polycomb complex protein BMI-1.	E3 ubiquitin-protein ligase RING1.	0.950
BMI1	RNF2	A0A384ARD7	A0A383YVZ3	Polycomb complex protein BMI-1.	E3 ubiquitin-protein ligase RING2 isoform X1.	0.999
CBX2	BMI1	A0A384AFL3	A0A384ARD7	Chromobox protein homolog 2.	Polycomb complex protein BMI-1.	0.956
CBX2	CBX4	A0A384AFL3	A0A384AFD0	Chromobox protein homolog 2.	E3 SUMO-protein ligase CBX4.	0.922
CBX2	CBX6	A0A384AFL3	A0A452CM28	Chromobox protein homolog 2.	Chromobox protein homolog 6 isoform X1.	0.593
CBX2	CBX7	A0A384AFL3	A0A384AP80	Chromobox protein homolog 2.	Chromobox protein homolog 7 isoform X1.	0.681
CBX2	CBX8	A0A384AFL3	A0A384AEV3	Chromobox protein homolog 2.	Chromobox protein homolog 8.	0.928
CBX2	LOC103003208	A0A384AFL3	A0A452CG21	Chromobox protein homolog 2.	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like.	0.885