62 items (Balaenoptera acutorostrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103014150	Usherin-like. (107 aa)
	IFT20	LOW QUALITY PROTEIN: intraflagellar transport protein 20 homolog. (159 aa)
	TMEM231	Transmembrane protein 231. (382 aa)
	RPGRIP1	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1. (1219 aa)
	LOC103019570	LOW QUALITY PROTEIN: whirlin. (524 aa)
	LOC114237153	Whirlin-like. (535 aa)
	MKS1	Meckel syndrome type 1 protein isoform X2. (608 aa)
	LOC103017945	Tetratricopeptide repeat protein 8-like. (451 aa)
	BBS9	Protein PTHB1 isoform X1. (896 aa)
	TTBK2	Tau-tubulin kinase 2 isoform X1. (1283 aa)
	FAM92B	LOW QUALITY PROTEIN: protein FAM92B. (356 aa)
	NF2	Merlin isoform X4. (619 aa)
	TMEM80	LOW QUALITY PROTEIN: transmembrane protein 80. (346 aa)
	RP1	Oxygen-regulated protein 1. (2068 aa)
	TBCC	Tubulin-specific chaperone C. (448 aa)
	BBS4	Bardet-Biedl syndrome 4 protein isoform X1. (517 aa)
	IFT52	Intraflagellar transport protein 52 homolog isoform X1. (461 aa)
	CETN3	Centrin-3. (167 aa)
	CPLANE1	Ciliogenesis and planar polarity effector 1 isoform X7. (3250 aa)
	CUNH5orf30	UNC119-binding protein C5orf30 homolog. (207 aa)
	TMEM237	LOW QUALITY PROTEIN: transmembrane protein 237. (403 aa)
	DYNC2LI1	Cytoplasmic dynein 2 light intermediate chain 1 isoform X1. (351 aa)
	CFAP36	Cilia- and flagella-associated protein 36. (342 aa)
	FAM161A	Protein FAM161A isoform X2. (717 aa)
	TMEM17	Transmembrane protein 17. (198 aa)
	TCTN2	Tectonic-2. (698 aa)
	TCTN1	Tectonic-1 isoform X1. (588 aa)
	SPATA7	Spermatogenesis-associated protein 7 isoform X1. (595 aa)
	TTC8	Tetratricopeptide repeat protein 8 isoform X1. (505 aa)
	ARL3	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	IFT57	Intraflagellar transport protein 57 homolog. (427 aa)
	CEP131	Centrosomal protein of 131 kDa. (1090 aa)
	USH1G	Usher syndrome type-1G protein isoform X1. (461 aa)
	TRAF3IP1	TRAF3-interacting protein 1 isoform X1. (654 aa)
	SEPT2	Septin-2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (361 aa)
	UNC119B	Protein unc-119 homolog B. (255 aa)
	CETN2	Centrin-2. (204 aa)
	CCSAP	Centriole, cilia and spindle-associated protein. (204 aa)
	IQCB1	IQ calmodulin-binding motif-containing protein 1 isoform X1. (522 aa)
	IFT140	Intraflagellar transport protein 140 homolog isoform X1. (1463 aa)
	WDR19	WD repeat-containing protein 19 isoform X1. (1342 aa)
	KIAA1549	UPF0606 protein KIAA1549 homolog. (978 aa)
	TOPORS	E3 ubiquitin-protein ligase Topors. (1044 aa)
	TMEM67	Meckelin. (996 aa)
	LOC103013378	Usherin. (4779 aa)
	FAM92A	Protein FAM92A. (434 aa)
	NPHP4	Nephrocystin-4. (1400 aa)
	TMEM107	Transmembrane protein 107 isoform X1. (183 aa)
	CC2D2A	Coiled-coil and C2 domain-containing protein 2A isoform X1. (1620 aa)
	RPGRIP1L	Protein fantom. (1268 aa)
	LCA5	Lebercilin isoform X1. (700 aa)
	B9D2	B9 domain-containing protein 2. (175 aa)
	GNAT1	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1. (350 aa)
	TSGA10IP	Testis-specific protein 10-interacting protein. (548 aa)
	INTU	Protein inturned. (935 aa)
	KIFAP3	Kinesin-associated protein 3 isoform X1. (793 aa)
	CFAP410	Cilia- and flagella-associated protein 410 isoform X1. (256 aa)
	MAK	Serine/threonine-protein kinase MAK isoform X1. (648 aa)
	PCM1	Pericentriolar material 1 protein isoform X1. (2123 aa)
	B9D1	B9 domain-containing protein 1. (204 aa)
	TMEM216	Transmembrane protein 216. (87 aa)
	LOC102997489	IQ calmodulin-binding motif-containing protein 1-like isoform X1. (178 aa)

Your Current Organism:

Balaenoptera acutorostrata

NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL3	B9D1	A0A384AIX6	A0A383ZH44	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	B9 domain-containing protein 1.	0.452
ARL3	B9D2	A0A384AIX6	A0A383YYX0	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	B9 domain-containing protein 2.	0.535
ARL3	BBS9	A0A384AIX6	A0A452CC84	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Protein PTHB1 isoform X1.	0.484
ARL3	CFAP36	A0A384AIX6	A0A384ARQ0	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Cilia- and flagella-associated protein 36.	0.853
ARL3	IFT20	A0A384AIX6	A0A452CI88	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	LOW QUALITY PROTEIN: intraflagellar transport protein 20 homolog.	0.726
ARL3	IFT57	A0A384AIX6	A0A384AIL9	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Intraflagellar transport protein 57 homolog.	0.540
ARL3	INTU	A0A384AIX6	A0A383ZB40	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Protein inturned.	0.495
ARL3	IQCB1	A0A384AIX6	A0A384A3K5	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	IQ calmodulin-binding motif-containing protein 1 isoform X1.	0.499
ARL3	LOC102997489	A0A384AIX6	A0A383ZKI6	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	IQ calmodulin-binding motif-containing protein 1-like isoform X1.	0.499
ARL3	NPHP4	A0A384AIX6	A0A383YU22	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Nephrocystin-4.	0.423
ARL3	RPGRIP1	A0A384AIX6	A0A452CFQ7	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	0.434
ARL3	RPGRIP1L	A0A384AIX6	A0A383YXW9	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Protein fantom.	0.418
ARL3	TBCC	A0A384AIX6	A0A384BDV6	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Tubulin-specific chaperone C.	0.842
ARL3	TMEM231	A0A384AIX6	A0A452CHC3	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Transmembrane protein 231.	0.408
ARL3	UNC119B	A0A384AIX6	A0A384A9M7	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Protein unc-119 homolog B.	0.979
B9D1	ARL3	A0A383ZH44	A0A384AIX6	B9 domain-containing protein 1.	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	0.452
B9D1	B9D2	A0A383ZH44	A0A383YYX0	B9 domain-containing protein 1.	B9 domain-containing protein 2.	0.971
B9D1	BBS9	A0A383ZH44	A0A452CC84	B9 domain-containing protein 1.	Protein PTHB1 isoform X1.	0.497
B9D1	CC2D2A	A0A383ZH44	A0A383YXI3	B9 domain-containing protein 1.	Coiled-coil and C2 domain-containing protein 2A isoform X1.	0.975
B9D1	IFT20	A0A383ZH44	A0A452CI88	B9 domain-containing protein 1.	LOW QUALITY PROTEIN: intraflagellar transport protein 20 homolog.	0.409