15 items (Balaenoptera acutorostrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHH	LOW QUALITY PROTEIN: sonic hedgehog protein. (271 aa)
	CSF1	Macrophage colony-stimulating factor 1. (513 aa)
	NGFR	Tumor necrosis factor receptor superfamily member 16. (427 aa)
	PAX9	LOW QUALITY PROTEIN: paired box protein Pax-9. (341 aa)
	DMRT3	Doublesex- and mab-3-related transcription factor 3. (506 aa)
	SP6	Transcription factor Sp6. (379 aa)
	FGF8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (244 aa)
	WNT10A	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (417 aa)
	TNFRSF11B	Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. (401 aa)
	MSX1	Homeobox protein MSX-1. (229 aa)
	BMP2	Bone morphogenetic protein 2. (395 aa)
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)
	RUNX2	Runt-related transcription factor 2. (343 aa)
	APCDD1	Protein APCDD1. (527 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)

Your Current Organism:

Balaenoptera acutorostrata

NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP2	BMP4	A0A384AWL0	A0A384B0Y0	Bone morphogenetic protein 2.	Bone morphogenetic protein 4 isoform X1.	0.927
BMP2	FGF8	A0A384AWL0	A0A384AJG6	Bone morphogenetic protein 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.512
BMP2	RUNX2	A0A384AWL0	A0A384B3J3	Bone morphogenetic protein 2.	Runt-related transcription factor 2.	0.813
BMP2	TGFB1	A0A384AWL0	A0A452C7A3	Bone morphogenetic protein 2.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.439
BMP4	BMP2	A0A384B0Y0	A0A384AWL0	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 2.	0.927
BMP4	FGF8	A0A384B0Y0	A0A384AJG6	Bone morphogenetic protein 4 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.657
BMP4	MSX1	A0A384B0Y0	A0A384AVM5	Bone morphogenetic protein 4 isoform X1.	Homeobox protein MSX-1.	0.655
BMP4	PAX9	A0A384B0Y0	A0A384A0S6	Bone morphogenetic protein 4 isoform X1.	LOW QUALITY PROTEIN: paired box protein Pax-9.	0.495
BMP4	RUNX2	A0A384B0Y0	A0A384B3J3	Bone morphogenetic protein 4 isoform X1.	Runt-related transcription factor 2.	0.757
BMP4	SHH	A0A384B0Y0	A0A452CFB9	Bone morphogenetic protein 4 isoform X1.	LOW QUALITY PROTEIN: sonic hedgehog protein.	0.736
BMP4	WNT10A	A0A384B0Y0	A0A384ALD2	Bone morphogenetic protein 4 isoform X1.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.607
CSF1	NGFR	A0A383Z352	A0A383ZMX0	Macrophage colony-stimulating factor 1.	Tumor necrosis factor receptor superfamily member 16.	0.671
CSF1	TGFB1	A0A383Z352	A0A452C7A3	Macrophage colony-stimulating factor 1.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.624
FGF8	BMP2	A0A384AJG6	A0A384AWL0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Bone morphogenetic protein 2.	0.512
FGF8	BMP4	A0A384AJG6	A0A384B0Y0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Bone morphogenetic protein 4 isoform X1.	0.657
FGF8	MSX1	A0A384AJG6	A0A384AVM5	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Homeobox protein MSX-1.	0.551
FGF8	NGFR	A0A384AJG6	A0A383ZMX0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Tumor necrosis factor receptor superfamily member 16.	0.674
FGF8	PAX9	A0A384AJG6	A0A384A0S6	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	LOW QUALITY PROTEIN: paired box protein Pax-9.	0.473
FGF8	RUNX2	A0A384AJG6	A0A384B3J3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Runt-related transcription factor 2.	0.410
FGF8	SHH	A0A384AJG6	A0A452CFB9	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	LOW QUALITY PROTEIN: sonic hedgehog protein.	0.867