STRINGSTRING
SFMBT1 SFMBT1 TWIST1 TWIST1 SMAD3 SMAD3 SOX15 SOX15 TIFAB TIFAB DCANP1 DCANP1 NEUROG1 NEUROG1 ERBB3 ERBB3 SIRT2 SIRT2 FGF8 FGF8 MRTFB MRTFB LOX LOX BMP4 BMP4 CREB1 CREB1 TGFB1 TGFB1 SHH SHH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFMBT1Scm-like with four MBT domains protein 1. (866 aa)
TWIST1Twist-related protein 1. (153 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
SOX15Protein SOX-15. (233 aa)
TIFABTRAF-interacting protein with FHA domain-containing protein B. (207 aa)
DCANP1LOW QUALITY PROTEIN: dendritic cell nuclear protein 1. (128 aa)
NEUROG1Neurogenin-1. (244 aa)
ERBB3Receptor tyrosine-protein kinase erbB-3. (1338 aa)
SIRT2NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (389 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (244 aa)
MRTFBMyocardin-related transcription factor B isoform X1. (1099 aa)
LOXProtein-lysine 6-oxidase. (284 aa)
BMP4Bone morphogenetic protein 4 isoform X1. (420 aa)
CREB1Cyclic AMP-responsive element-binding protein 1 isoform X1. (341 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
SHHLOW QUALITY PROTEIN: sonic hedgehog protein. (271 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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