STRINGSTRING
TSC1 TSC1 FERMT2 FERMT2 ROCK1 ROCK1 NRP1 NRP1 SFRP1 SFRP1 COL16A1 COL16A1 TEK TEK S100A10 S100A10 FMN1 FMN1 PTPRJ PTPRJ EPB41L5 EPB41L5 MYOC MYOC KDR KDR VEGFA VEGFA HRG HRG THY1 THY1 PPM1F PPM1F ITGB1BP1 ITGB1BP1 ABL1 ABL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TSC1Hamartin. (1155 aa)
FERMT2Fermitin family homolog 2 isoform X1. (706 aa)
ROCK1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
NRP1Neuropilin; Belongs to the neuropilin family. (924 aa)
SFRP1Secreted frizzled-related protein 1. (295 aa)
COL16A1Collagen alpha-1(XVI) chain. (1619 aa)
TEKAngiopoietin-1 receptor isoform X1. (1125 aa)
S100A10Protein S100-A10; Belongs to the S-100 family. (97 aa)
FMN1Formin-1 isoform X1. (1410 aa)
PTPRJPeptidylprolyl isomerase. (1290 aa)
EPB41L5Band 4.1-like protein 5. (805 aa)
MYOCMyocilin. (473 aa)
KDRVascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1356 aa)
VEGFAVascular endothelial growth factor A isoform X2; Belongs to the PDGF/VEGF growth factor family. (186 aa)
HRGLOW QUALITY PROTEIN: histidine-rich glycoprotein. (314 aa)
THY1Thy-1 membrane glycoprotein. (161 aa)
PPM1FProtein phosphatase 1F. (386 aa)
ITGB1BP1Integrin beta-1-binding protein 1. (200 aa)
ABL1Tyrosine-protein kinase. (1149 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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