Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARIH2 | RBCK1 | A0A383Z1S8 | A0A384B168 | RBR-type E3 ubiquitin transferase. | ranBP-type and C3HC4-type zinc finger-containing protein 1. | 0.415 |
| ARIH2 | RNF5 | A0A383Z1S8 | A0A384B2X5 | RBR-type E3 ubiquitin transferase. | E3 ubiquitin-protein ligase RNF5. | 0.490 |
| BARD1 | BFAR | A0A384AL56 | A0A384AM33 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | Bifunctional apoptosis regulator isoform X1. | 0.460 |
| BARD1 | HLTF | A0A384AL56 | A0A384ALD0 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | Helicase-like transcription factor isoform X1. | 0.465 |
| BARD1 | LOC103008156 | A0A384AL56 | A0A383ZRU2 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.999 |
| BARD1 | LONRF1 | A0A384AL56 | A0A384BGA2 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | LON peptidase N-terminal domain and RING finger protein 1. | 0.465 |
| BARD1 | LONRF2 | A0A384AL56 | A0A384BDJ6 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | LON peptidase N-terminal domain and RING finger protein 2. | 0.465 |
| BARD1 | LONRF3 | A0A384AL56 | A0A383ZTJ4 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | LON peptidase N-terminal domain and RING finger protein 3 isoform X2. | 0.465 |
| BARD1 | RAD18 | A0A384AL56 | A0A384AZ28 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | E3 ubiquitin-protein ligase RAD18 isoform X1. | 0.515 |
| BARD1 | RAG1 | A0A384AL56 | A0A384A1T6 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] | 0.642 |
| BARD1 | RNF2 | A0A384AL56 | A0A383YVZ3 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | E3 ubiquitin-protein ligase RING2 isoform X1. | 0.537 |
| BARD1 | RNF8 | A0A384AL56 | A0A384BE39 | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.774 |
| BFAR | BARD1 | A0A384AM33 | A0A384AL56 | Bifunctional apoptosis regulator isoform X1. | LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1. | 0.460 |
| BMI1 | LOC103008156 | A0A384ARD7 | A0A383ZRU2 | Polycomb complex protein BMI-1. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.501 |
| BMI1 | PCGF2 | A0A384ARD7 | A0A383ZRN6 | Polycomb complex protein BMI-1. | Polycomb group RING finger protein 2 isoform X1. | 0.891 |
| BMI1 | PCGF3 | A0A384ARD7 | A0A384A2G8 | Polycomb complex protein BMI-1. | Polycomb group RING finger protein 3 isoform X1. | 0.526 |
| BMI1 | PCGF5 | A0A384ARD7 | A0A384AJL9 | Polycomb complex protein BMI-1. | Polycomb group RING finger protein 5 isoform X1. | 0.571 |
| BMI1 | RING1 | A0A384ARD7 | A0A384AHY5 | Polycomb complex protein BMI-1. | E3 ubiquitin-protein ligase RING1. | 0.950 |
| BMI1 | RNF2 | A0A384ARD7 | A0A383YVZ3 | Polycomb complex protein BMI-1. | E3 ubiquitin-protein ligase RING2 isoform X1. | 0.999 |
| CBL | CBLB | A0A452C5N4 | A0A384AIN4 | E3 ubiquitin-protein ligase CBL. | E3 ubiquitin-protein ligase CBL-B isoform X1. | 0.920 |
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