STRINGSTRING
POU1F1 POU1F1 INTS8 INTS8 POLR2I POLR2I POLR2B POLR2B GTF2A2 GTF2A2 INTS14 INTS14 SNAPC5 SNAPC5 SSU72 SSU72 INTS11 INTS11 POLR2A POLR2A RPRD1A RPRD1A POLR2C POLR2C GTF2F1 GTF2F1 TAF13 TAF13 RPAP2 RPAP2 NABP1 NABP1 NCBP2 NCBP2 POU2F1 POU2F1 ZNF143 ZNF143 CUNH11orf88 CUNH11orf88 GTF2E2 GTF2E2 INTS5 INTS5 INTS6L INTS6L POLR2G POLR2G INTS1 INTS1 TMTC1 TMTC1 TAF9 TAF9 CDK7 CDK7 SUPT4H1 SUPT4H1 GTF2B GTF2B POLR2E POLR2E SNAPC3 SNAPC3 RPRD2 RPRD2 INTS3 INTS3 LOC103015962 LOC103015962 CCNT1 CCNT1 POU6F1 POU6F1 SP1 SP1 NABP2 NABP2 SUPT5H SUPT5H GTF2E1 GTF2E1 POLR2D POLR2D CCNQ CCNQ INTS7 INTS7 LOC102998168 LOC102998168 TBP TBP SRRT SRRT POLR2J POLR2J GTF2F2 GTF2F2 LOC103016635 LOC103016635 TAF6 TAF6 INTS4 INTS4 PHAX PHAX GTF2A1 GTF2A1 LOC103016840 LOC103016840 INTS2 INTS2 GTF2A1L GTF2A1L TBPL1 TBPL1 INTS12 INTS12 ICE1 ICE1 CCNT2 CCNT2 CCDC66 CCDC66 INTS9 INTS9 SNAPC1 SNAPC1 TBPL2 TBPL2 RPRD1B RPRD1B INTS6 INTS6 CDK9 CDK9 SNAPC4 SNAPC4 INTS13 INTS13 POLR2H POLR2H TMTC2 TMTC2 ELL ELL OCEL1 OCEL1 ELL3 ELL3 POU2F3 POU2F3 TMTC4 TMTC4 ZC3H8 ZC3H8 NCBP1 NCBP1 ZC3H6 ZC3H6 ELL2 ELL2 ZNF76 ZNF76 TAF11 TAF11 FNDC10 FNDC10 TAF8 TAF8 POLR2L POLR2L ZC3H4 ZC3H4 POU2F2 POU2F2 SNAPC2 SNAPC2 PCF11 PCF11 POLR2K POLR2K CCNK CCNK INTS10 INTS10 ICE2 ICE2 TMTC3 TMTC3 TAF5 TAF5 POU6F2 POU6F2 POLR2F POLR2F
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POU1F1POU domain protein. (317 aa)
INTS8Integrator complex subunit 8 isoform X1. (995 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
INTS14Integrator complex subunit 14 isoform X1. (518 aa)
SNAPC5snRNA-activating protein complex subunit 5 isoform X1. (101 aa)
SSU72RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1. (178 aa)
INTS11Integrator complex subunit 11. (592 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1963 aa)
RPRD1ARegulation of nuclear pre-mRNA domain-containing protein 1A isoform X1. (312 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3 isoform X1. (275 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (518 aa)
TAF13Transcription initiation factor TFIID subunit 13. (124 aa)
RPAP2Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1. (611 aa)
NABP1SOSS complex subunit B2 isoform X1. (205 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
POU2F1POU domain protein. (744 aa)
ZNF143LOW QUALITY PROTEIN: zinc finger protein 143. (651 aa)
CUNH11orf88UPF0722 protein C11orf88 homolog isoform X1. (168 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (306 aa)
INTS5Integrator complex subunit 5. (1019 aa)
INTS6LIntegrator complex subunit 6-like isoform X1. (709 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
INTS1Integrator complex subunit 1. (2112 aa)
TMTC1Protein O-mannosyl-transferase TMTC1 isoform X1. (862 aa)
TAF9Transcription initiation factor TFIID subunit 9. (265 aa)
CDK7Cyclin-dependent kinase 7 isoform X1; Belongs to the protein kinase superfamily. (346 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
GTF2BTranscription initiation factor IIB. (316 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
SNAPC3snRNA-activating protein complex subunit 3 isoform X1. (413 aa)
RPRD2Regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1. (1461 aa)
INTS3Integrator complex subunit 3 isoform X1. (1088 aa)
LOC103015962DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
CCNT1cyclin-T1 isoform X1; Belongs to the cyclin family. (727 aa)
POU6F1POU domain protein. (607 aa)
SP1Transcription factor Sp1. (787 aa)
NABP2SOSS complex subunit B1. (211 aa)
SUPT5HTranscription elongation factor SPT5. (1083 aa)
GTF2E1General transcription factor IIE subunit 1 isoform X1. (439 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (104 aa)
CCNQcyclin-Q isoform X1; Belongs to the cyclin family. (202 aa)
INTS7Integrator complex subunit 7. (962 aa)
LOC102998168Phosphorylated adapter RNA export protein-like. (380 aa)
TBPTATA-box-binding protein isoform X1. (317 aa)
SRRTLOW QUALITY PROTEIN: serrate RNA effector molecule homolog. (891 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
LOC103016635LOW QUALITY PROTEIN: uroplakin-3b-like protein 1. (254 aa)
TAF6Transcription initiation factor TFIID subunit 6. (666 aa)
INTS4Integrator complex subunit 4 isoform X1. (964 aa)
PHAXPhosphorylated adapter RNA export protein. (380 aa)
GTF2A1Transcription initiation factor IIA subunit 1. (336 aa)
LOC103016840Integrator complex subunit 6-like. (173 aa)
INTS2Integrator complex subunit 2 isoform X1. (1197 aa)
GTF2A1LTFIIA-alpha and beta-like factor. (477 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
INTS12LOW QUALITY PROTEIN: integrator complex subunit 12. (463 aa)
ICE1Little elongation complex subunit 1. (2239 aa)
CCNT2cyclin-T2 isoform X1; Belongs to the cyclin family. (745 aa)
CCDC66Coiled-coil domain-containing protein 66 isoform X1. (986 aa)
INTS9Integrator complex subunit 9 isoform X1. (671 aa)
SNAPC1snRNA-activating protein complex subunit 1 isoform X1. (375 aa)
TBPL2TATA box-binding protein-like protein 2. (449 aa)
RPRD1BRegulation of nuclear pre-mRNA domain-containing protein 1B isoform X1. (326 aa)
INTS6Integrator complex subunit 6 isoform X1. (840 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
SNAPC4snRNA-activating protein complex subunit 4. (1357 aa)
INTS13Integrator complex subunit 13 isoform X1. (706 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
TMTC2Protein O-mannosyl-transferase TMTC2. (840 aa)
ELLRNA polymerase II elongation factor ELL. (612 aa)
OCEL1occludin/ELL domain-containing protein 1. (206 aa)
ELL3RNA polymerase II elongation factor ELL3. (400 aa)
POU2F3POU domain protein. (436 aa)
TMTC4Protein O-mannosyl-transferase TMTC4 isoform X1. (775 aa)
ZC3H8Zinc finger CCCH domain-containing protein 8 isoform X1. (309 aa)
NCBP1Nuclear cap-binding protein subunit 1 isoform X1. (790 aa)
ZC3H6Zinc finger CCCH domain-containing protein 6. (1185 aa)
ELL2RNA polymerase II elongation factor ELL2. (640 aa)
ZNF76Zinc finger protein 76 isoform X1. (570 aa)
TAF11Transcription initiation factor TFIID subunit 11 isoform X1. (211 aa)
FNDC10LOW QUALITY PROTEIN: fibronectin type III domain-containing protein 10. (118 aa)
TAF8Transcription initiation factor TFIID subunit 8. (292 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (58 aa)
ZC3H4LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 4. (1190 aa)
POU2F2POU domain protein. (678 aa)
SNAPC2snRNA-activating protein complex subunit 2. (265 aa)
PCF11pre-mRNA cleavage complex 2 protein Pcf11. (1682 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
CCNKcyclin-K; Belongs to the cyclin family. (410 aa)
INTS10LOW QUALITY PROTEIN: integrator complex subunit 10. (709 aa)
ICE2Little elongation complex subunit 2 isoform X1. (1001 aa)
TMTC3Protein O-mannosyl-transferase TMTC3 isoform X1. (962 aa)
TAF5Transcription initiation factor TFIID subunit 5 isoform X1. (851 aa)
POU6F2POU domain protein. (510 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (115 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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