STRINGSTRING
LOC103016974 LOC103016974 LOC103019838 LOC103019838 LOC103019385 LOC103019385 LOC103018297 LOC103018297 LOC103018846 LOC103018846 LOC103017256 LOC103017256 LOC102998884 LOC102998884 LOC103004037 LOC103004037 LOC103010190 LOC103010190 LOC103004316 LOC103004316 LOC103010782 LOC103010782 ZNRD1 ZNRD1 LOC103003205 LOC103003205 UBTF UBTF TAF1C TAF1C ERCC3 ERCC3 GCNA GCNA LOC103018418 LOC103018418 LOC103005469 LOC103005469 TBP TBP GTF2H5 GTF2H5 LOC103002676 LOC103002676 LOC103002948 LOC103002948 LOC103002779 LOC103002779 RRN3 RRN3 UBTFL1 UBTFL1 GTF2H3 GTF2H3 TBPL1 TBPL1 MNAT1 MNAT1 TBPL2 TBPL2 CCNH CCNH POLR1C POLR1C GTF2H4 GTF2H4 POLR2H POLR2H TAF1B TAF1B LOC102997204 LOC102997204 POLR1B POLR1B POLR1E POLR1E POLR2L POLR2L POLR2K POLR2K LOC103019119 LOC103019119 LOC103020690 LOC103020690 LOC102998612 LOC102998612 LOC103009898 LOC103009898 LOC103008837 LOC103008837 POLR2F POLR2F TAF1D TAF1D CD3EAP CD3EAP CUNH11orf88 CUNH11orf88 LOC103019280 LOC103019280 TAF1A TAF1A CBX3 CBX3 LOC103000493 LOC103000493 ERCC2 ERCC2 LOC103019413 LOC103019413 LOC103020561 LOC103020561 TWISTNB TWISTNB GTF2H1 GTF2H1 POLR1A POLR1A LOC103000259 LOC103000259 CDK7 CDK7 POLR2E POLR2E UBN2 UBN2 LOC103015848 LOC103015848 LOC103018292 LOC103018292 LOC103015570 LOC103015570 LOC103019568 LOC103019568 LOC103020394 LOC103020394 LOC103020116 LOC103020116
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103016974Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103019838Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103019385Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103018297Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103018846Histone H2A; Belongs to the histone H2A family. (147 aa)
LOC103017256Histone H2B; Belongs to the histone H2B family. (143 aa)
LOC102998884Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103004037LOW QUALITY PROTEIN: putative histone H2B type 2-D; Belongs to the histone H2B family. (130 aa)
LOC103010190Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103004316Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103010782Histone H2B; Belongs to the histone H2B family. (126 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
LOC103003205Histone H2B; Belongs to the histone H2B family. (126 aa)
UBTFNucleolar transcription factor 1. (720 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C. (784 aa)
ERCC3General transcription and DNA repair factor IIH helicase subunit XPB. (782 aa)
GCNAAcidic repeat-containing protein. (392 aa)
LOC103018418Histone H2A; Belongs to the histone H2A family. (109 aa)
LOC103005469Late histone H2B.L4-like; Belongs to the histone H2B family. (140 aa)
TBPTATA-box-binding protein isoform X1. (317 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
LOC103002676Histone H2B type 1-A-like; Belongs to the histone H2B family. (126 aa)
LOC103002948Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103002779Histone H2A; Belongs to the histone H2A family. (168 aa)
RRN3RNA polymerase I-specific transcription initiation factor RRN3 isoform X1. (650 aa)
UBTFL1Upstream-binding factor 1-like protein 1. (411 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
TBPL2TATA box-binding protein-like protein 2. (449 aa)
CCNHcyclin-H isoform X1; Belongs to the cyclin family. (328 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1 isoform X1. (346 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
TAF1BTATA box-binding protein-associated factor RNA polymerase I subunit B. (592 aa)
LOC102997204Histone H2A; Belongs to the histone H2A family. (129 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49. (419 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (58 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC103019119Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103020690Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102998612Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103009898Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103008837Histone H3.1-like isoform X1. (165 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (115 aa)
TAF1DLOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit D. (321 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (532 aa)
CUNH11orf88UPF0722 protein C11orf88 homolog isoform X1. (168 aa)
LOC103019280Histone H2A; Belongs to the histone H2A family. (128 aa)
TAF1ATATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1. (450 aa)
CBX3Chromobox protein homolog 3. (183 aa)
LOC103000493Histone H2B; Belongs to the histone H2B family. (126 aa)
ERCC2General transcription and DNA repair factor IIH helicase subunit XPD. (760 aa)
LOC103019413Histone H2B; Belongs to the histone H2B family. (122 aa)
LOC103020561LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like. (454 aa)
TWISTNBDNA-directed RNA polymerase I subunit RPA43. (332 aa)
GTF2H1General transcription factor IIH subunit 1 isoform X1. (548 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1717 aa)
LOC103000259General transcription factor IIH subunit. (395 aa)
CDK7Cyclin-dependent kinase 7 isoform X1; Belongs to the protein kinase superfamily. (346 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
UBN2Ubinuclein-2 isoform X1. (1152 aa)
LOC103015848Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103018292Histone H2B type 1-L-like; Belongs to the histone H2B family. (154 aa)
LOC103015570Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103019568Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103020394Histone H3.1-like. (136 aa)
LOC103020116Histone H2A; Belongs to the histone H2A family. (130 aa)
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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